CX043274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1) HSP 1 Score: 510.76 bits (1314), Expect = 3.818e-144 Identity = 242/275 (88.00%), Postives = 255/275 (92.73%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVP 827 DPPHGQDKFVQ+ GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I A+ E+Y +DL YLK+KVDAGADLIITQLFYDTD+FLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLG EMCKKILA GIKTLHLYTLNMEKSAL IL+NLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSY+SRT+GWDQYP GRWGDSRNPSYGAL+D+QF RPR R KKL EEWAVP Sbjct: 113 DPPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQSTEGATPEAYSNDLAYLKQKVDAGADLIITQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGTEMCKKILATGIKTLHLYTLNMEKSALGILMNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYISRTLGWDQYPHGRWGDSRNPSYGALTDYQFTRPRGRGKKLQEEWAVP 387
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2) HSP 1 Score: 505.753 bits (1301), Expect = 1.228e-142 Identity = 232/275 (84.36%), Postives = 256/275 (93.09%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVP 827 DPPHGQDKFVQ++GGF CALDLV HIRS YGDYFGITVAGYPE HPD IG +G+ASNE+YQSDL YLKKK+DAGADLI+TQLFYDTD+FLKFVNDCRQIGI+CPIVPGIMPINNY+GFLRMTGFCKTKIP E+ AALEPIKDNEEAVKAYGIHLG EMCKK+LAHG+K+LHLYTLNMEKSALAIL+NLG+I+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P+GRWGDSR+ SYGALSDHQF RPR+RDKKL +EW VP Sbjct: 113 DPPHGQDKFVQVEGGFDCALDLVNHIRSKYGDYFGITVAGYPEAHPDVIGENGLASNEAYQSDLEYLKKKIDAGADLIVTQLFYDTDIFLKFVNDCRQIGISCPIVPGIMPINNYRGFLRMTGFCKTKIPVEVMAALEPIKDNEEAVKAYGIHLGTEMCKKMLAHGVKSLHLYTLNMEKSALAILMNLGMIDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWEDFPQGRWGDSRSASYGALSDHQFSRPRARDKKLQQEWVVP 387
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 504.212 bits (1297), Expect = 3.574e-142 Identity = 234/275 (85.09%), Postives = 254/275 (92.36%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVP 827 DPPHGQDKFVQ++GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I +G A+ E+Y +DL YLK+KVDAGADLI+TQLFYDTD+FLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIP+EITAAL+PIKDNEEAV+ YGIHLG EMCKKILA GIKTLHLYTLNM+KSA+ IL+NLGLIEESK+SR LPWRP TNVFRVKEDVRPIFWANRPKSYL RT+GWDQYP GRWGDSRNPSYGAL+DHQF RPR R KKL EEWAVP Sbjct: 113 DPPHGQDKFVQVEGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQGEGGATLEAYSNDLAYLKRKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPSEITAALDPIKDNEEAVRQYGIHLGTEMCKKILATGIKTLHLYTLNMDKSAIGILMNLGLIEESKVSRPLPWRPATNVFRVKEDVRPIFWANRPKSYLKRTLGWDQYPHGRWGDSRNPSYGALTDHQFTRPRGRGKKLQEEWAVP 387
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 4.999e-136 Identity = 223/275 (81.09%), Postives = 246/275 (89.45%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHGIKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVP 827 DPPHGQDKFVQ++GGFACALDLV HIRS YGDYFGITVAGYPE HPD I DG+A+ ESYQSDL YLKKKVDAGADLI+TQLFYDTD+FLKFVNDCRQIGI CPIVPGIMPI+NYKGFLRM GFCKTKIPAE+TAALEPIKDN+EAVKAYGIH EMCKKILAHGI +LHLYTLN++KSA+ IL+NLGLI+ESKISRSLPWR P NVFR KEDVRPIFWANRPKSY+SRT GW+ +P GRWGDS + +Y LSD+QF RP+ RDKKL +EW VP Sbjct: 113 DPPHGQDKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESYQSDLAYLKKKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGINCPIVPGIMPISNYKGFLRMAGFCKTKIPAELTAALEPIKDNDEAVKAYGIHFATEMCKKILAHGITSLHLYTLNVDKSAIGILMNLGLIDESKISRSLPWRRPANVFRTKEDVRPIFWANRPKSYISRTKGWNDFPHGRWGDSHSAAYSTLSDYQFARPKGRDKKLQQEWVVP 387
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 259.996 bits (663), Expect = 1.174e-68 Identity = 127/269 (47.21%), Postives = 178/269 (66.17%), Query Frame = 3 Query: 21 DKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEW 818 D++ + +GGF A+DLVKHIRS +GDYF I VAGYP+GHP+ S+++DL +LK+KV AGAD IITQLF++ D F +FV C +GITCPIVPGI PI Y ++ K ++P EI +EPIKDN+ A++ YGI L +C+++LA G + LH YTLN E + +L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W Sbjct: 163 DQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMW 421
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.214e-67 Identity = 126/269 (46.84%), Postives = 176/269 (65.43%), Query Frame = 3 Query: 21 DKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEW 818 D++ + +GGF A+DLVKHIRS +GDYF + VAGYP+GHP+ S+++DL +LK+KV AGAD IITQLF++ D F +FV C +GITCPIVPGI PI Y ++ K ++P EI +EPIKDN+ A++ YGI L +C ++LA G + LH YTLN E + +L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S + L + W Sbjct: 163 DQWEEEEGGFNYAVDLVKHIRSEFGDYFDLCVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKQSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCHELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPRELLLKMW 421
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.892e-67 Identity = 124/270 (45.93%), Postives = 181/270 (67.04%), Query Frame = 3 Query: 21 DKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSALAILLNLGL-IEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEW 818 D++ + +GGF A DLVKHIR+ +GDYF + VAGYP+GHP+ ES+++DL +LK+KV AGAD IITQLF++ + F +FV C +IGITCP++PGI PI Y ++ K ++P +I +EPIKDN+ A++ YGI +C+++LA G + LH YTLN E + + +L LGL IE+ + R LPW + R EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W Sbjct: 162 DQWEEEEGGFNYATDLVKHIRNEFGDYFDVCVAGYPKGHPE---------GESFEADLKHLKEKVAAGADFIITQLFFEAETFFRFVKACSEIGITCPVLPGIFPIQGYHSLRQLVKLSKLEVPQQIKDVIEPIKDNDAAIRNYGIEQAVSLCQELLASGLVPGLHFYTLNREVATIEVLKRLGLWIEDPR--RPLPWALSAHPKRRVEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMW 420
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.197e-66 Identity = 122/263 (46.39%), Postives = 171/263 (65.02%), Query Frame = 3 Query: 39 QGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDHQ--FMRPRSRDKKLHEEW 818 +GGF+ A DLVKHIR+ + DYF I VAGYP GHPD ES++ DL +LK+KV AGAD IITQLF++ F FV C +IGI+CPI+PGI PI Y ++ K ++P +I +EPIKDN+ A++ YGI L +C+++L G + LH YTLN E + + +L LG+ E R LPW + R +EDVRPIFWA+RPKSY+ RT WD++P GRWG+S +P++G L D+ +++ +S ++L + W Sbjct: 168 EGGFSYATDLVKHIRTEFADYFDICVAGYPRGHPDA---------ESFEDDLKHLKEKVSAGADFIITQLFFEASTFFSFVKACTEIGISCPILPGIFPIQGYTSLRQLVKLSKLEVPQKIKDVIEPIKDNDAAIRNYGIELAVRLCRELLDSGLVPGLHFYTLNREVATMEVLKQLGMWTEDP-RRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQDWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPREELLKMW 420
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR2_YEAST (Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae GN=MET13 PE=1 SV=2) HSP 1 Score: 234.572 bits (597), Expect = 5.282e-61 Identity = 124/283 (43.82%), Postives = 173/283 (61.13%), Query Frame = 3 Query: 3 DPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSALAILLNLGLI-EESKISRS----LPWRPPTNVFRVKEDVRPIFWANRPKSYLSRTVGW--DQYPRGRWGDSRNPSYGALSDHQFMRPRSRDKKLHEEWAVP 827 DPP + + ++GGF A DL+K+I+S YGD+F I VAGYPE HP+ N+ + DL YLK+K+DAG D IITQ+FYD D F+ + + R G+ PI+PGIMPI Y FLR + + IP ++ L+PIKD++E V+ G +L EMC+K+L G + LH+YT+N+EK+ L IL L ++ ES+ + LPWR N R E+VRPIFW RP SY++RT W D++P GR+GDS +P++G L R K E W+ P Sbjct: 116 DPPRDAENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPEL-------PNKDVKLDLEYLKQKIDAGGDFIITQMFYDVDNFINWCSQVRAAGMDVPIIPGIMPITTYAAFLRRAQWGQISIPQHFSSRLDPIKDDDELVRDIGTNLIVEMCQKLLDSGYVSHLHIYTMNLEKAPLMILERLNILPTESEFNAHPLAVLPWRKSLNPKRKNEEVRPIFWKRRPYSYVARTSQWAVDEFPNGRFGDSSSPAFGDLDLCGSDLIRQSANKCLELWSTP 391
BLAST of CX043274 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 4.627e-57 Identity = 112/240 (46.67%), Postives = 159/240 (66.25%), Query Frame = 3 Query: 57 ALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKKKVDAGADLIITQLFYDTDMFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPAEITAALEPIKDNEEAVKAYGIHLGAEMCKKILAHG-IKTLHLYTLNMEKSALAILLNLGLIEESKISRSLPWRPPT-NVFRVKEDVRPIFWANRPKSYLSRTVGWDQYPRGRWGDSRNPSYGALSDH 770 ALD+++ IR YG+YF I AGYP GHP SY++DL+YLK K DAGA+ +ITQLF++ + F KFV DCR+IGIT PI+PGIMPI Y+ R+ + +IP I LEPIK +++AV+ YG EMC+++L +G ++HLYT+N E S IL +LGL + + R PW+ + + R E VRPI+W+ RP+SY++RT WDQ+P GRWG+S +P++G +S + Sbjct: 188 ALDMIRWIREEYGNYFSIGCAGYPLGHPQA---------PSYKADLMYLKAKCDAGANFVITQLFFEAETFEKFVRDCREIGITQPIIPGIMPIMGYESIKRIAKLSQLEIPQHILDDLEPIKHDDDAVQKYGTERCIEMCRRLLDNGTAPSIHLYTMNREGSIREILKSLGL-WKLEGDRVFPWKNRSQHPIRCLESVRPIYWSFRPRSYITRTRDWDQFPNGRWGNSSSPAFGDVSSY 417 The following BLAST results are available for this feature:
BLAST of CX043274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043274 ID=CX043274; Name=CX043274; organism=Citrus sinensis; type=EST; length=829bpback to top |