EY665388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_ARATH (40S ribosomal protein S18 OS=Arabidopsis thaliana GN=RPS18A PE=1 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 6.621e-69 Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAE+DNLM +VANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERL+KIRNHRGLRHYWG Sbjct: 1 MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWG 128 HSP 2 Score: 29.6462 bits (65), Expect = 6.621e-69 Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRGK +G S+K Sbjct: 133 GQHTKTTGRRGK-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_BRABE (40S ribosomal protein S18 OS=Branchiostoma belcheri GN=RPS18 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 4.474e-55 Identity = 96/128 (75.00%), Postives = 116/128 (90.62%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRV+NTN+DG++KIMFALTSIKG+GRR +NIVCKKAD+D++KRAGELS E++ L+ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N+LD KLR+DLERL+KIR HRGLRHYWG Sbjct: 1 MSLVIPEKFQHILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 4.474e-55 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_AEQIR (40S ribosomal protein S18 OS=Aequipecten irradians GN=RPS18 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 3.733e-54 Identity = 94/128 (73.44%), Postives = 116/128 (90.62%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 M+L+ E FQHILRV+NTN+DGK+KIMFA+T+IKG+GRR AN+VCKKADVD+ KRAGELS E++ ++ +++NPRQ+KIP+WFLNRQKD KDGKYSQV+SNALD KLR+DLERL+KIR HRGLRHYWG Sbjct: 1 MALIIPEKFQHILRVMNTNIDGKRKIMFAMTAIKGMGRRYANVVCKKADVDITKRAGELSEDEIERVITIMSNPRQYKIPNWFLNRQKDVKDGKYSQVMSNALDNKLREDLERLKKIRAHRGLRHYWG 128 HSP 2 Score: 27.7202 bits (60), Expect = 3.733e-54 Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGK 503 GQHT+TTGRRG+ Sbjct: 133 GQHTKTTGRRGR 144
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_DANRE (40S ribosomal protein S18 OS=Danio rerio GN=rps18 PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.661e-51 Identity = 89/128 (69.53%), Postives = 113/128 (88.28%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+NKRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERL+KIR HRGLRH+WG Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLNKRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDIKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 1.661e-51 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_ICTPU (40S ribosomal protein S18 OS=Ictalurus punctatus GN=rps18 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 6.251e-51 Identity = 88/128 (68.75%), Postives = 113/128 (88.28%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D++KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERL+KIR HRGLRH+WG Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLSKRAGELTEDEVERVVTIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 6.251e-51 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_RAT (40S ribosomal protein S18 OS=Rattus norvegicus GN=Rps18 PE=1 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 8.148e-51 Identity = 88/128 (68.75%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERL+KIR HRGLRH+WG Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 8.148e-51 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_PIG (40S ribosomal protein S18 OS=Sus scrofa GN=RPS18 PE=2 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 8.148e-51 Identity = 88/128 (68.75%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERL+KIR HRGLRH+WG Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 8.148e-51 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_MOUSE (40S ribosomal protein S18 OS=Mus musculus GN=Rps18 PE=2 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 8.148e-51 Identity = 88/128 (68.75%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERL+KIR HRGLRH+WG Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 8.148e-51 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_HUMAN (40S ribosomal protein S18 OS=Homo sapiens GN=RPS18 PE=1 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 8.148e-51 Identity = 88/128 (68.75%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERL+KIR HRGLRH+WG Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 8.148e-51 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151
BLAST of EY665388 vs. ExPASy Swiss-Prot
Match: RS18_CAPHI (40S ribosomal protein S18 OS=Capra hircus GN=RPS18 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 8.148e-51 Identity = 88/128 (68.75%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 70 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLEKIRNHRGLRHYWG 453 MSLV E FQHILRVLNTN+DG++KI FA+T+IKG+GRR A++V +KAD+D+ KRAGEL+ E++ ++ ++ NPRQ+KIPDWFLNRQKD KDGKYSQV++N LD KLR+DLERL+KIR HRGLRH+WG Sbjct: 1 MSLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWG 128 HSP 2 Score: 28.4906 bits (62), Expect = 8.148e-51 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 468 GQHTRTTGRRGKGMLGSSQK 527 GQHT+TTGRRG+ +G S+K Sbjct: 133 GQHTKTTGRRGR-TVGVSKK 151 The following BLAST results are available for this feature:
BLAST of EY665388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665388 ID=EY665388; Name=EY665388; organism=Citrus sinensis; type=EST; length=1022bpback to top |