CV885281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FAD5C_DICDI (Probable Delta(5) fatty acid desaturase C OS=Dictyostelium discoideum GN=DDB_G0294553 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13 Identity = 63/229 (27.51%), Postives = 104/229 (45.41%), Query Frame = 1 Query: 181 KKYITAEELRTHNKAED-LWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEVSEISKDYRRLYIEFAK---------QGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAHLG------SGMLLGFLW-----IQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTH-NAHHIACNSLDYDPDL 801 KK + +E+ HN E+ +WISI G VYD+T++ K HPGG+ L+ AG+DVT+ F +YHP T ++ +E+ ++S Y+E +K + F+K A +A + + VY L +H LL ++ + S ++ HD+ H + +PK K + + G S +W H HH+ N + DPD+ Sbjct: 9 KKLYSWKEISKHNTIENGIWISIDGLVYDITKFIKHHPGGEQVLILAAGRDVTNLFESYHPMTD-------LPSKMLKQYEIGQVSTMEFPKYVEKSKFYSTLKERVREHFKKSNKDPKFAFGIIARL--IFVYWFLITSYYVSHYAFIENFYLNCLLAIVYSLSNSLFSLHMMHDACHSAISHNPKVWKWLG-ATYDLFIGASFFYWCNQHVIGHHVYTNIRNADPDI 227
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12 Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 1 Query: 169 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAF-IAYHPGTAWQYLDKLFTGYFVQDFEVSEISKDYRRLYI 459 M +++K ++ EE+ HNK +D W+ I GKVYDVT + HPGGD LL+ G+D T+ F H TA +DK F G E+ S R Y+ Sbjct: 1 MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIG------EIDSSSVPATRTYV 92
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11 Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 169 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAF-IAYHPGTAWQYLDKLFTG 399 M +EKK + EE+ HNK +D W+ I GKVYDVT + HPGGD LL+ G+D T+ F H TA ++K + G Sbjct: 1 MASEKKVLGFEEVSQHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIG 78
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11 Identity = 35/78 (44.87%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 169 MEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAF-IAYHPGTAWQYLDKLFTG 399 M E K T E+ HN A+D W+ I GKVYDVT++ HPGGD LL+ G+D TD F H +A LD+ + G Sbjct: 1 MGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVG 78 The following BLAST results are available for this feature:
BLAST of CV885281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885281 ID=CV885281; Name=CV885281; organism=Citrus sinensis; type=EST; length=847bpback to top |