CV885281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS2_PONAB (Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.241e-22 Identity = 69/233 (29.61%), Postives = 108/233 (46.35%), Query Frame = 1 Query: 154 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAV 825 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F+ L + + + + V + W + L + +L Q+ ++ HD GH V PK+N + L G S WW H HH N DPD+ + VF + Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYFGNGWISTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVFVL 241
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS2_HUMAN (Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.927e-22 Identity = 74/244 (30.33%), Postives = 114/244 (46.72%), Query Frame = 1 Query: 154 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAV 825 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + L G S WW H HH N DPD+ + VF + Sbjct: 9 EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVFVL 241
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS2_MACFA (Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.823e-22 Identity = 74/244 (30.33%), Postives = 113/244 (46.31%), Query Frame = 1 Query: 154 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAV 825 + AA E + EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I +D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + L G S WW H HH N DPD+ + VF + Sbjct: 9 EGAAEREVPMPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSTQHPGGQRVIGHYAGEDATDAFRAFHPDLKFVGKFLKPLLIGELAPEEPSQDHGKNSKIIEDFRALKKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVFVL 241
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS1_PAPAN (Fatty acid desaturase 1 OS=Papio anubis GN=FADS1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.236e-21 Identity = 66/239 (27.62%), Postives = 112/239 (46.86%), Query Frame = 1 Query: 145 PIFQSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGV------LCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVF 819 P+ + +Y T +E+ + E+ W+ I KVYD++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ K HV + L+ ++++ G + S L +LL IQ+ ++ HD GH V ++ K+N + L G+ +WW H HH N DPD+ P F Sbjct: 5 PVAAKTPVQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYDISEFTRRHPGGSRVISHYAGQDATDPFVAFHSNKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVEQMGLM-KANHV----FFLLYLLHILLLDGAAWLTLWIFGTSFLPFLLCAVLLTAAQIQAGWLQHDLGHLSVFSTSKWNHLVHHFVIGHLKGVPASWWNHMHFQHHAKPNCFGKDPDINMHPFF 238
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS2_DANRE (Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.227e-21 Identity = 65/222 (29.28%), Postives = 101/222 (45.50%), Query Frame = 1 Query: 193 TAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEVSEIS----------KDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAH-LGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAV 825 T EE++ H K D W+ ++ KVY+V++W K+HPGG L + AG+D T+AF A+HP Q + K + + E SE S +D+R L +G F+ + + L + L+ + V + W + L ++L Q+ ++ HD GH V + N + L G S WW H HH N DPD+ + F V Sbjct: 22 TWEEVQKHTKHGDQWVVVERKVYNVSQWVKRHPGGLRILGHYAGEDATEAFTAFHPNL--QLVRKYLKPLLIGELEASEPSQDRQKNAALVEDFRALRERLEAEGCFKTQPLFFALHLGHILLLEAIAFMMVWYFGTGWINTLIVAVILATAQSQAGWLQHDFGHLSVFKTSGMNHLVHKFVIGHLKGASAGWWNHRHFQHHAKPNIFKKDPDVNMLNAFVV 241
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS2_XENLA (Fatty acid desaturase 2 OS=Xenopus laevis GN=fads2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.606e-20 Identity = 65/229 (28.38%), Postives = 104/229 (45.41%), Query Frame = 1 Query: 199 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDFEVSEISK------DYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-WA---HLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAV 825 EE++ HN D W+ I+ KVY++++W K+HPGG + + AG+D TDAF A+HP + ++L L+ G ++ + K D+R L +F+ F+ ++ +L E + W +LG+G +LL Q+ ++ HD GH V K+N + L G S WW H HH N DPD+ + VF + Sbjct: 26 EEIQKHNLKTDKWLVIERKVYNISQWVKRHPGGMRIIGHYAGEDATDAFHAFHPDKTFVRKFLKPLYIGELAENEPSQDRDKNAQQVEDFRALRKTAEDMRLFKSN-----------PAFFIFYLFHILLIEFLAWCTLHYLGTGWIPAIITVLLLTISQAQAGWLQHDFGHLSVFEKSKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFSKDPDVNMVNVFVL 243
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS2_BOVIN (Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.098e-20 Identity = 63/233 (27.04%), Postives = 105/233 (45.06%), Query Frame = 1 Query: 154 QSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAV 825 + A +EA EE++ HN D W+ I KVY++T+W+ +HPGG + + AG+D TDAF+A+H + +++ L G + + S+I++D+R L +F+ Q L + M + + + + W + + +L Q+ ++ HD GH V +N I L G S WW H HH N DPD+ + VF + Sbjct: 9 EGATELEAPMPTFRWEEIQKHNLRTDKWLVIDRKVYNITKWSSRHPGGQRVIGHYAGEDATDAFLAFHRNLDFVRKFMKPLLIGELAPEEPSQDRGKNSQITEDFRALRKTAEDMNLFKSNQLFFLLHLAHIIAMESIAWFTLFYFGNGWIPTIITAFVLATSQAQAGWLQHDYGHLSVYKKSMWNHIVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVFVL 241
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS3_BOVIN (Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 61/216 (28.24%), Postives = 100/216 (46.30%), Query Frame = 1 Query: 199 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDF------EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWA-HLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVF 819 E++R HN D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H ++ ++L L G + + +++ +D+R L +FE K L + M V+ + W + ++L QS + HD GH + + ++N +AQ L G S WW + H HH N DPD+ PVF Sbjct: 24 EQVRRHNLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLSFVRKFLQPLLIGELAPEEPSQDGPQNTQLIEDFRALRQAVEDMKLFEAKPAFFGLLLGHILAMEVLAWLMIYMLGPGWVPSTLAALILAISQAQSWCLQHDLGHTSIFRNSRWNHLAQQFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPVF 239
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FADS1_HUMAN (Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 64/238 (26.89%), Postives = 108/238 (45.38%), Query Frame = 1 Query: 145 PIFQSAALMEAEKKYITAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVF 819 P+ A +Y T +E+ + E+ W+ I KVY+++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ + ++ L A + V+G S L +LL + Q+ ++ HD GH V ++ K+N + L G +WW H HH N DPD+ P F Sbjct: 5 PVAAETAAQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATDPFVAFHINKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVERMGLMKANHVFFLLYLLHILLLDGAAWLTLWVFGT----SFLPFLLCAVLLSAVQAQAGWLQHDFGHLSVFSTSKWNHLLHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRKDPDINMHPFF 238
BLAST of CV885281 vs. ExPASy Swiss-Prot
Match: FAD2L_MOUSE (Fatty acid desaturase 2-like protein OS=Mus musculus PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.740e-20 Identity = 69/225 (30.67%), Postives = 101/225 (44.89%), Query Frame = 1 Query: 193 TAEELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQDFEVSEISK------DYRRLYIEFAKQGMFEKK-----QHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQLISGNCLTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAV 825 T +E++ H++ D W+ I KVY+VT+WA +HPGG L + AGQD TDAF A H G YL L G + E +K D+R L MF H+A + ++ ++ +G S W + LL Q +++ HD GH + K+N + L G+S WW + H HH+ N DPD+ P+F V Sbjct: 66 TWQEIQRHSQEADQWLVIDRKVYNVTDWAGKHPGGRRVLNHYAGQDATDAFRAMHLDLGMVKLYLKPLLIGELSPEEPSQEKNKNAQLVEDFRELRKTLEAMNMFSANLRFFFLHLAQILILEISAWLILHHFG-----SSWLVTILISFLLTVSQAQCSFLQHDLGHLSMFKKSKWNHLMHKFVMCHLKGLSADWWNYRHFQHHVKPNIYPKDPDIDVGPLFLV 285 The following BLAST results are available for this feature:
BLAST of CV885281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885281 ID=CV885281; Name=CV885281; organism=Citrus sinensis; type=EST; length=847bpback to top |