CV885188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: RN126_BOVIN (RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17 Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 484 GLRP---LPASMSDFLMGS-GFDRVLDQLTQLDFNGVTRFVN---PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRGRNVGGGPDETLGLT 876 GL P L ++ D+ G+ G D ++ QL + +F N PPA K I+++P V + E HV C VCK+ + L R++PC H++H CI+PWL +SCP+CR+ L G+N P G++ Sbjct: 168 GLGPWGVLHSNPMDYAWGANGLDAIITQL-------LNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL------TGQNTATDPPGLAGVS 292
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15 Identity = 38/74 (51.35%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 598 PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNE 819 PPA+KA +ES+P I S E C VC F+ EMPC H++H CILPWLS NSCPLCR ELP + Sbjct: 64 PPAAKAVVESLPRTVIRSSKA--ELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 135
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15 Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 598 PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNE 819 PPA+K A+E++P I S E C VC F+ A EMPC H++H CILPWLS NSCPLCR ELP + Sbjct: 52 PPAAKTAVENLPRTVIRGSQA--ELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 123
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15 Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 1 Query: 529 SGFDRVLDQLTQLDFNGVT-RFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNE 819 +G++ +L L + D G R PPA+K+AIE++ ++ S CAVCK+ + +++PC H YHG+CI+PWL RNSCP+CR +L + Sbjct: 207 AGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETD 304
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.154e-15 Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 598 PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNE 819 PPA+KA +ES+P I+ + + C VC F+ EMPC H++H CILPWLS NSCPLCR ELP + Sbjct: 64 PPAAKAVVESLPRTVISSAKA--DLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTD 135
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15 Identity = 37/74 (50.00%), Postives = 45/74 (60.81%), Query Frame = 1 Query: 598 PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNE 819 PPA+K +E++P I S E C VC F+ A EMPC H++H CILPWLS NSCPLCR ELP + Sbjct: 52 PPAAKTVVENLPRTVIRGSQA--ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTD 123
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase CG7694 OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.824e-14 Identity = 39/83 (46.99%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 574 NGVTRFVN-PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNE 819 NG+ + P ASK AI +PV I +S + C+VCKEP + + R +PCKH +H ECIL WL NSCPLCR EL + Sbjct: 35 NGIDMEIEVPEASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETD 117
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: PJA2_MOUSE (E3 ubiquitin-protein ligase Praja2 OS=Mus musculus GN=Pja2 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.707e-12 Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 1 Query: 595 NPPASKAAIESMPVVTIAESHVA--KESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRGRNVGGGPD 858 NPPASK +I+ +P + E H A +E C +C + + A E+PC H +H C+ WL +CP+CRR P D PD Sbjct: 604 NPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAASSDPD 693
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: PJA2_RAT (E3 ubiquitin-protein ligase Praja2 OS=Rattus norvegicus GN=Pja2 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.229e-12 Identity = 32/90 (35.56%), Postives = 45/90 (50.00%), Query Frame = 1 Query: 595 NPPASKAAIESMPVVTIAESHVA--KESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRGRNVGGGPD 858 NPPASK +I+ +P + E H A +E C +C + + A E+PC H +H C+ WL +CP+CRR P D PD Sbjct: 604 NPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAASSEPD 693
BLAST of CV885188 vs. ExPASy Swiss-Prot
Match: PJA2_PONAB (E3 ubiquitin-protein ligase Praja2 OS=Pongo abelii GN=PJA2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.106e-11 Identity = 31/90 (34.44%), Postives = 45/90 (50.00%), Query Frame = 1 Query: 595 NPPASKAAIESMPVVTIAESHVA--KESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRGRNVGGGPD 858 NPPASK +I+ +P + E H A +E C +C + + A E+PC H +H C+ WL +CP+CRR P + PD Sbjct: 605 NPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIEASAAPSSEPD 694 The following BLAST results are available for this feature:
BLAST of CV885188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885188 ID=CV885188; Name=CV885188; organism=Citrus sinensis; type=EST; length=878bpback to top |