CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACC1 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 10987) GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D     A   GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HPAVAE  V+G+ D  +G    A +V   E           ++ +E+  + + KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  281 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDIGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPVAFVVKSGE-----------VTEEEIIHFCEAKLAKYKVPKKACFLEELPRNASKKLLRRELR 475          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACC0 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH820) GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 68/208 (32.69%), Postives = 107/208 (51.44%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HP VAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  282 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------ITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACAN (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 68/208 (32.69%), Postives = 107/208 (51.44%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HP VAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  281 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------ITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 475          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACAC (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 68/208 (32.69%), Postives = 107/208 (51.44%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HP VAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  282 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------ITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACAA (2-succinylbenzoate--CoA ligase OS=Bacillus anthracis (strain A0248) GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 68/208 (32.69%), Postives = 107/208 (51.44%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HP VAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  282 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------ITEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_CHRVO (Acetyl-coenzyme A synthetase OS=Chromobacterium violaceum GN=acsA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 72/228 (31.58%), Postives = 118/228 (51.75%), Query Frame = -2
Query:  269 WETITGHR--FLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 919
            +ET+ G R   ++ +  TE    +  PL GA   K G+   PLPGV   I ++       G G   V     PSL +  W  P+  K ++  D F    +  GD+  +DE+GY+ I+GR   D++ V G++L  +EIES L+ +P VAE  V+G P +  G+AV A +VL + A+   + +K V +  EL  W   ++     P  +   ++LP+   GK+ ++ L++
Sbjct:  404 YETVGGGRCPIVDTWWQTETGSTMIAPLPGAIATKPGSCTLPLPGVIADIVDESGAQVEPGRGGFLVIKKPFPSLVRTIWNDPERFKKTYFPDEFDGKYYLAGDSAHRDENGYFWIMGRID-DVLNVSGHRLGTMEIESALVANPLVAEAAVVGKPHEVKGEAVVAFVVL-KGARPQGDAAKTVAA--ELKNWVAHEIGKIAQPDDIRFGENLPKTRSGKIMRRLLRS 627          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACHK (2-succinylbenzoate--CoA ligase OS=Bacillus thuringiensis subsp. konkukian GN=menE PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 68/208 (32.69%), Postives = 107/208 (51.44%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HP VAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  282 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------VTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LUCI_PHOPY (Luciferin 4-monooxygenase OS=Photinus pyralis PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 65/210 (30.95%), Postives = 110/210 (52.38%), Query Frame = -2
Query:  263 YGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV---GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 883
            YG+TE   AI     G  K G VG  +P  + K+ + ++G    GV   GE+CV+ P +   Y   P+ T      DG+  +GD    DED ++ I+ R  + ++K  GY+++  E+ES+LL+HP + +  V GLPD D G+  +A++VLE      +++    ++ Q   T AK      KL   +   D +P+   GK++ ++++  L
Sbjct:  340 YGLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGK-TLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKS-LIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQ--VTTAK------KLRGGVVFVDEVPKGLTGKLDARKIREIL 539          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_METFK (Acetyl-coenzyme A synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=acsA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.854e-21
Identity = 66/225 (29.33%), Postives = 117/225 (52.00%), Query Frame = -2
Query:  269 WETITGHRFLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKSP--SLFKEYWKLPKVTKDSFTAD---GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 919
            W+T TG   +              PL GA   K G+   PLPG+ + I E++    +  G G + VK P  S+ +  W  P+  + ++  +   G +  GD+  +DEDGY+ I+GR   D++ V G++L  +EIES L+ +P VAE  ++G P    G+++ A +VL+ E + + E +K +    +L  W   ++ P   P  +   ++LP+   GK+ ++ L++
Sbjct:  419 WQTETGAHMIA-------------PLPGAIDLKPGSCTRPLPGIIMDIVEEDGTHIEGTGGGLLVVKKPWPSMIRNIWGNPERFRKAYFPEELNGLYLAGDSAHRDEDGYFWIMGRID-DVLNVSGHRLGTMEIESALVANPLVAEAAIVGKPHDIKGESIVAYVVLKGE-RPEGEAAKTIAG--QLREWVGKEIGPIAKPDEIRFGENLPKTRSGKIMRRLLRS 626          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: FADK_ECOLI (Short-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadK PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.727e-21
Identity = 67/220 (30.45%), Postives = 116/220 (52.73%), Query Frame = -2
Query:  263 GHRFLERYGMTEF----VMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCT-WAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 904
            G + L  YG TE     V+ + +PL  +R   T G    GV++K+ +D   +   G  GE   + P++F  Y+  P++T  +   +G++ +GD  + DE GY  I GR   DI+  GG  +S+ E+E +LL+HP + + CV+ + D+  G+   A +VL+             LSL+E+   +++ ++A YK P  + + + LPR   GK+ K  L+  +
Sbjct:  327 GIKLLSVYGSTESSPHAVVNLDDPL--SRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKK-DIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHS--------LSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTTSGKIQKFLLRKDI 535          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
MENE_BACC12.185e-2133.652-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC02.185e-2132.692-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACAN2.185e-2132.692-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAC2.185e-2132.692-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
MENE_BACAA2.185e-2132.692-succinylbenzoate--CoA ligase OS=Bacillus anthrac... [more]
ACSA_CHRVO2.185e-2131.58Acetyl-coenzyme A synthetase OS=Chromobacterium vi... [more]
MENE_BACHK2.854e-2132.692-succinylbenzoate--CoA ligase OS=Bacillus thuring... [more]
LUCI_PHOPY2.854e-2130.95Luciferin 4-monooxygenase OS=Photinus pyralis PE=1... [more]
ACSA_METFK2.854e-2129.33Acetyl-coenzyme A synthetase OS=Methylobacillus fl... [more]
FADK_ECOLI3.727e-2130.45Short-chain-fatty-acid--CoA ligase OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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