CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSF3_BOVIN (Acyl-CoA synthetase family member 3, mitochondrial OS=Bos taurus GN=ACSF3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.499e-54 Identity = 112/243 (46.09%), Postives = 154/243 (63.37%), Query Frame = -2 Query: 263 MQQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV---------------------GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 928 +++W+ ITGH LERYGMTE MA+SNPL AR G+VG PLPGV+V+I + D++ GE+ V+ PS+F+EYW P+ TK +FT+DG+FKTGDT +DG Y I GRTS DI+K GGYK+SALE+E +LL HP++ + V+G+PD +G V+A++ L+E LS +EL WA+ LAPY +P+ L L + +PRN MGKVNK++L QL Sbjct: 341 LEKWKGITGHTLLERYGMTEIGMALSNPLTAARLPGSVGTPLPGVEVRIVSENPQKDSSPYLIHAEGSEENTKVTPGFEEKEGELLVRGPSVFREYWDKPEETKAAFTSDGWFKTGDT-VVFKDGCYWIRGRTSVDIIKSGGYKVSALEVERLLLAHPSITDVAVIGVPDMTWGQRVTAVVTLQEGHS---------LSHRELKEWARGVLAPYAVPSELLLVEEIPRNQMGKVNKRDLVRQL 573
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSF3_MOUSE (Acyl-CoA synthetase family member 3, mitochondrial OS=Mus musculus GN=Acsf3 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 1.403e-52 Identity = 110/242 (45.45%), Postives = 149/242 (61.57%), Query Frame = -2 Query: 263 MQQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV--------------------GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 928 +++W + TGH LERYGMTE MA+SNPL AR G+VG PLPGV+V+I + + + GE+ V+ PS+F+EYW P+ TK +FT+DG+F+TGDT +D Y I GRTS DI+K GGYK+SALEIE LL HP++ + V+G+PD +G V+A++ L+E LS +L WA+ LAPY +P+ L L + +PRN MGKVNKKEL QL Sbjct: 340 LEKWRSATGHTLLERYGMTEIGMALSNPLTEARVPGSVGTPLPGVEVRIISENPQKGSPYIIHAEGNERGTKVTPGFEEKEGELLVRGPSVFREYWDKPEETKSAFTSDGWFRTGDTAVF-KDARYWIRGRTSVDIIKTGGYKVSALEIERHLLAHPSITDVAVIGVPDMTWGQRVTAVVALQEGHS---------LSHGDLKEWARGVLAPYAVPSELLLVEEIPRNQMGKVNKKELLKQL 571
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSF3_HUMAN (Acyl-CoA synthetase family member 3, mitochondrial OS=Homo sapiens GN=ACSF3 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 7.700e-51 Identity = 109/240 (45.42%), Postives = 147/240 (61.25%), Query Frame = -2 Query: 275 MQQWETITGHRFLERYGMTEFVMAISNPLRGA-RKAGTVGNPLPGVQVKIAEDESGSDAAGV---------------------GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 928 +++W+ ITGH LERYGMTE MA+S PL A R G+VG PLPGVQV+I + +A GE+ V+ PS+F+EYW P+ TK +FT DG+FKTGDT +DG Y I GRTS DI+K GGYK+SALE+E LL HP++ + V+G+PD +G V+A++ L E LS +EL WA++ LAPY +P+ L L + +PRN MGK++KK L Sbjct: 340 LEKWKNITGHTLLERYGMTEIGMALSGPLTTAVRLPGSVGTPLPGVQVRIVSENPQREACSYTIHAEGDERGTKVTPGFEEKEGELLVRGPSVFREYWNKPEETKSAFTLDGWFKTGDT-VVFKDGQYWIRGRTSVDIIKTGGYKVSALEVEWHLLAHPSITDVAVIGVPDMTWGQRVTAVVTLREGHS---------LSHRELKEWARNVLAPYAVPSELVLVEEIPRNQMGKIDKKAL 569
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSF3_XENLA (Acyl-CoA synthetase family member 3, mitochondrial OS=Xenopus laevis GN=acsf3 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.006e-50 Identity = 108/239 (45.19%), Postives = 146/239 (61.09%), Query Frame = -2 Query: 275 MQQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDE-----------SGSDAAGV----------GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 928 +++W+ ITGH LERYGMTE MA++NPL G R G VG PLPGV+V+ + D+ G GE+ V+ P++FKEYW T+++FT+DG+FKTGDT +DG Y ILGRTS DI+K GGYK+SALE+E LL HP++ + V+G PD +G V+AI+ L + LSLQEL WA+ +APY +P L + +PRN MGK+NKK+L Sbjct: 343 LERWQEITGHTLLERYGMTEIGMALTNPLHGPRVPGAVGAPLPGVEVRTVTQNPRKEGTSYTTHAQGDSTGTMVSVGLENREGELQVRGPAVFKEYWNKRLDTQEAFTSDGWFKTGDTAMY-KDGTYWILGRTSVDIIKSGGYKVSALEVERHLLGHPSITDVAVIGAPDVTWGQRVAAIVKL---------RDGHALSLQELKEWARAVMAPYCIPAELIRVEEIPRNQMGKINKKQL 571
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFA_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 8.006e-32 Identity = 82/220 (37.27%), Postives = 121/220 (55.00%), Query Frame = -2 Query: 275 QQWETITGHRFLERYGMTEFV-MAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV--GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 925 Q++E +TG + +E YG++E + +N + G K G++G P P I +E+G AA GEI VK P + K YW P+ T + DG+ TGD G DE+G++ I R DI+ GGY + E+E L EH A+ E V G+PD G+ V A +VL++ AK D E EL +A+ +LAPYK+P LP+ A+GK+ ++ L Sbjct: 341 QKFEKVTGGKLVEGYGLSEASPVTHANFIWGKNKPGSIGCPWPSTDAAIYSEETGELAAPYEHGEIIVKGPQVMKGYWNKPEETA-AVLRDGWLFTGDMGYMDEEGFFYIADRKK-DIIIAGGYNIYPREVEEALYEHEAIQEIVVAGVPDSYRGETVKAFVVLKKGAKADTE---------ELDAFARSRLAPYKVPKAYEFRKELPKTAVGKILRRRL 549
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFA_SALTY (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhimurium GN=fadD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.278e-29 Identity = 73/222 (32.88%), Postives = 119/222 (53.60%), Query Frame = -2 Query: 266 QQWETITGHRFLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 925 ++W +TG LE YG+TE +S NP +G++G P+P + K+ +D+ A G GE+CVK P + YW+ P T D DG+ TGD DEDG+ I+ R D++ V G+ + EIE V+++H V E +G+P G+AV +V K P L+ L T+ + L YK+P ++ + LP++ +GK+ ++EL+++ Sbjct: 343 ERWVKLTGQYLLEGYGLTECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGEAGELCVKGPQVMLGYWQRPDAT-DEIIKDGWLHTGDIAVMDEDGFLRIVDRKK-DMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVV----------KKDPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDE 552
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFA_SALTI (Long-chain-fatty-acid--CoA ligase OS=Salmonella typhi GN=fadD PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.278e-29 Identity = 73/222 (32.88%), Postives = 119/222 (53.60%), Query Frame = -2 Query: 266 QQWETITGHRFLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 925 ++W +TG LE YG+TE +S NP +G++G P+P + K+ +D+ A G GE+CVK P + YW+ P T D DG+ TGD DEDG+ I+ R D++ V G+ + EIE V+++H V E +G+P G+AV +V K P L+ L T+ + L YK+P ++ + LP++ +GK+ ++EL+++ Sbjct: 343 ERWVKLTGQYLLEGYGLTECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVAPGEAGELCVKGPQVMLGYWQRPDAT-DEIIKDGWLHTGDIAVMDEDGFLRIVDRKK-DMILVSGFNVYPNEIEDVVMQHSGVQEVAAVGVPSGSSGEAVKLFVV----------KKDPALTDDALITFCRRHLTGYKVPKQVEFREELPKSNVGKILRRELRDE 552
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFA_ECOLI (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli (strain K12) GN=fadD PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.669e-29 Identity = 72/222 (32.43%), Postives = 120/222 (54.05%), Query Frame = -2 Query: 266 QQWETITGHRFLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 925 ++W +TG LE YG+TE +S NP +G++G P+P + K+ +D+ G GE+CVK P + YW+ P T D +G+ TGD DE+G+ I+ R D++ V G+ + EIE V+++HP V E +G+P G+AV +V K P L+ + L T+ + +L YK+P + D LP++ +GK+ ++EL+++ Sbjct: 343 ERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDAT-DEIIKNGWLHTGDIAVMDEEGFLRIVDRKK-DMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVV----------KKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFA_ECOL6 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O6 GN=fadD PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.669e-29 Identity = 72/222 (32.43%), Postives = 120/222 (54.05%), Query Frame = -2 Query: 266 QQWETITGHRFLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 925 ++W +TG LE YG+TE +S NP +G++G P+P + K+ +D+ G GE+CVK P + YW+ P T D +G+ TGD DE+G+ I+ R D++ V G+ + EIE V+++HP V E +G+P G+AV +V K P L+ + L T+ + +L YK+P + D LP++ +GK+ ++EL+++ Sbjct: 343 ERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDAT-DEIIKNGWLHTGDIAVMDEEGFLRIVDRKK-DMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVV----------KKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFA_ECO57 (Long-chain-fatty-acid--CoA ligase OS=Escherichia coli O157:H7 GN=fadD PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.180e-29 Identity = 71/222 (31.98%), Postives = 121/222 (54.50%), Query Frame = -2 Query: 266 QQWETITGHRFLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 925 ++W +TG LE YG+TE +S NP +G++G P+P + K+ +D+ + G GE+CV+ P + YW+ P T D +G+ TGD DE+G+ I+ R D++ V G+ + EIE V+++HP V E +G+P G+AV +V K P L+ + L T+ + +L YK+P + D LP++ +GK+ ++EL+++ Sbjct: 343 ERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVSPGQPGELCVRGPQVMLGYWQRPDAT-DEIIKNGWLHTGDIAVMDEEGFLRIVDRKK-DMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVV----------KKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |