CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_THIDA (Acetyl-coenzyme A synthetase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=acsA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20
Identity = 69/226 (30.53%), Postives = 117/226 (51.77%), Query Frame = -2
Query:  272 ETITGHR--FLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 916
            E I G R   ++ +  TE    +  PL GA   K G+   PLPG+   + ++  G  A G G   V     PS  +  W  P+  K ++  +      +  GD+  +D+DGY+ I+GR   D++ V G++L  +EIES L+ +P VAE  V+G P +  G+AV A +VL + A+   +++K +   +EL  W   ++ P   P  +   ++LP+   GK+ ++ L+
Sbjct:  405 EVIGGGRCPIVDTWWQTETGAHMIAPLPGAVPTKPGSCTLPLPGIMAAVTDEHGGPVAKGQGGYLVIKRPFPSQLRTLWGDPERFKKTYFPEEMGGKTYLAGDSAHRDDDGYFWIMGRID-DVLNVSGHRLGTMEIESALVSNPRVAEAAVVGRPHEVKGEAVVAYVVL-KGARAVGDEAKDI--ARELRDWVGKEIGPIAKPDEIRFGENLPKTRSGKIMRRLLR 626          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CL3_ORYSJ (Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa subsp. japonica GN=4CL3 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20
Identity = 62/216 (28.70%), Postives = 115/216 (53.24%), Query Frame = -2
Query:  257 YGMTEFVMAISNPLRGAR-----KAGTVGNPLPGVQVKIAEDESGSDAAG--VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAA 883
            YGMTE    ++  L  A+     K+G+ G  +   ++KI + ++G+       GEIC++   + K Y   P+ TK++   DG+  TGD G  D+D    I+ R   +I+K  G+++   E+E++L+ HP + +  V+ + D   G+   A IV  E ++  +++ K  ++          ++  YK   ++F  DS+P+N  GK+ +K+L+ +LAA
Sbjct:  332 YGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAELKIVDPDTGTSLGRNQSGEICIRGEQIMKGYLNDPEATKNTIDEDGWLHTGDIGFVDDDDEIFIVDRLK-EIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEVPVAFIVRTEGSEITEDEIKKFVA---------KEVVFYKRINKVFFTDSIPKNPSGKILRKDLRARLAA 537          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_LARHH (Acetyl-coenzyme A synthetase OS=Laribacter hongkongensis (strain HLHK9) GN=acsA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20
Identity = 69/231 (29.87%), Postives = 112/231 (48.48%), Query Frame = -2
Query:  269 MQQWETITGHR--FLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 928
            M  +E + G R   ++ +  TE   A+  P+ GA   K G+   PLPG+   I ++       G G   V     PSL +  W  P   K ++  + F    +  GD+  +DE GY+ I+GR   D++ V G++L  +EIES L+ +P VAE  V+G P    G+AV A +VL+       E  K      EL +W   ++     P  +   ++LP+   GK+ ++ L++
Sbjct:  400 MWYYEVVGGGRCPIVDTWWQTETGSAMIAPMPGAVATKPGSCTLPLPGIMADIVDESGAQVEPGRGGFLVIKKPFPSLVRTIWNDPDRFKKTYFPEEFNGQYYLAGDSANRDESGYFWIMGRID-DVLNVSGHRLGTMEIESALVANPLVAEAAVVGKPHDVKGEAVVAFVVLKGIRPEGDEAKKVA---AELKSWVAHEIGKIAQPDDIRFGENLPKTRSGKIMRRLLRS 626          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACP2 (2-succinylbenzoate--CoA ligase OS=Bacillus pumilus (strain SAFR-032) GN=menE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.850e-20
Identity = 73/215 (33.95%), Postives = 102/215 (47.44%), Query Frame = -2
Query:  266 GHRFLERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 904
            G    + YGMTE    I    P     K G+ G PL G ++KI +          GEI VK  ++ K Y    + T  +F   G+ KTGD G  DE+G+  +L R S D++  GG  +   EIE+VLL H  V E  V G+ D  +G+  +A +V + +         P   L  LC   +  LA YK P      D LPRNA  K+ +  LK++
Sbjct:  278 GFPVFQSYGMTETCSQIVTLAPEFSVEKLGSAGKPLFGCELKIQDGTRICRPFEHGEIMVKGANVMKGYLYREESTAAAFD-QGWLKTGDIGYVDEEGFLFVLDRRS-DLIISGGENIYPAEIEAVLLTHSHVKEAGVTGIDDDRWGEVPAAFLVTDHKI--------PENELYALC---ESHLAKYKWPASFHFVDELPRNASNKLQRHRLKSK 479          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_RUBXD (Acetyl-coenzyme A synthetase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=acsA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.850e-20
Identity = 64/216 (29.63%), Postives = 115/216 (53.24%), Query Frame = -2
Query:  269 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKSP--SLFKEYWKLPKVTKDSFT---ADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 892
            ++ +  TE    + +PL G    K G+   PLPG+   I ++E    +  GVG + +K P   + +  +K P+  ++++     D +F +GD  ++DEDGY+ + GR   D++ V G+++S  E+ES L+ HPAVAE  V+G  D+D G A+ A ++LE   + + E +      QEL    +  +  +  P  +     LP+   GK+ ++ L++
Sbjct:  406 VDTWWQTETGGIMISPLPGITRTKPGSATFPLPGIFAGIYDEEGNEIEGPGVGNLVIKRPWPGMLRTLYKDPERFRETYWQKYGDVYF-SGDGARRDEDGYFWVTGRVD-DVINVSGHRISTAEVESALVAHPAVAEAAVIGRYDEDTGQAIVAYVILEGGREGNDELA------QELRQQVRKVIGAHARPQEIIFTPDLPKTRSGKIMRRILRS 613          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BURP8 (Acetyl-coenzyme A synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=acsA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.850e-20
Identity = 72/230 (31.30%), Postives = 115/230 (50.00%), Query Frame = -2
Query:  269 WETITGHR--FLERYGMTEFVMAISNPLRGARKA--GTVGNPLPGVQVKIAEDESGSDAA-GVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQD-EDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 919
            +E + G R   ++ +  TE    +  PL GA     G+   PLPG+   +  DE+G D   G G I V     PS+ +  W  P+  K S+  +      +  GD   +D E GY+ I+GR   D++ V G++L  +EIES L+ +P VAE  V+G PD   G+AV A +VL+      +E +K    L+    W   ++ P   P  +   D+LP+   GK+ ++ L++
Sbjct:  409 YENVGGSRCPIVDTWWQTETGGHMITPLPGATPLVPGSCTLPLPGIMAAVV-DETGQDVPNGQGGILVVKRPWPSMIRTIWGDPERYKKSYFPEELGGTLYLAGDGSVRDKETGYFTIMGRID-DVLNVSGHRLGTMEIESALVANPLVAEAAVVGRPDDTTGEAVCAFVVLKRARPEGEEAAKIAADLR---NWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRS 633          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_NITEU (Acetyl-coenzyme A synthetase OS=Nitrosomonas europaea GN=acsA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.416e-20
Identity = 63/217 (29.03%), Postives = 107/217 (49.31%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKS---PSLFKEYWKLP-KVTKDSFTAD----GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  P  GA   K G+   PLPG+   + ++       G G   V     PS+ +  W  P +  K  F  D     ++  GD+  +D+DGY+ I+GR   D++ V G++L  +EIES L+ HP VAE  V+G P +  G+ V A + L E+   DQ  ++   +L+E   W   ++     P  +   ++LP+   GK+ ++ L+
Sbjct:  415 VDTWWQTETGCHMIAPAPGAISTKPGSCTLPLPGIDAAVVDETGHPVEQGKGGFLVIKRPFPSMLRTLWNDPERFRKTYFPTDIAGGRYYLAGDSAHRDQDGYFWIMGRVD-DVLNVSGHRLGTMEIESALVAHPLVAEAAVVGKPHEIKGEVVVAFVTLREKLPDDQRAAEIAATLRE---WVASEIGAIARPEEIRFGENLPKTRSGKIMRRLLR 627          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_NITEC (Acetyl-coenzyme A synthetase OS=Nitrosomonas eutropha (strain C91) GN=acsA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.416e-20
Identity = 64/227 (28.19%), Postives = 113/227 (49.78%), Query Frame = -2
Query:  269 WETITGHRFLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKS---PSLFKEYWKLPKVTKDS-FTAD----GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 919
            W+T TG   +              P+ GA   K G+   PLPG+   + ++       G G   V     PS+ +  W  P+  +++ F AD     ++  GD+  +D+DGY+ I+GR   D++ V G++L  +EIES L+ HP VAE  V+G P +  G+ + A +VL  +   DQ+ ++   +L+E   W   ++     P  +   ++LP+   GK+ ++ L++
Sbjct:  419 WQTETGSHMIA-------------PIPGAIPAKPGSCTLPLPGIDAAVVDETGLPAEQGKGGFLVIKRPFPSMLRTLWNDPERFRNTYFPADIAGGHYYLAGDSAHRDQDGYFWIMGRID-DVLNVSGHRLGTMEIESALVAHPLVAEAAVVGKPHEIRGEVIVAFVVLRGKLPDDQQAAEIAETLRE---WVSSEIGAIARPEEIRFGENLPKTRSGKLMRRLLRS 628          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACS1_CANGA (Acetyl-coenzyme A synthetase 1 OS=Candida glabrata GN=ACS1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.416e-20
Identity = 66/224 (29.46%), Postives = 114/224 (50.89%), Query Frame = -2
Query:  254 LERYGMTEFVMAISNPLRGA---RKAGTVGNPLPGVQVKIAEDESG---SDAAGVGEICVKSP--SLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQE-LCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ Y  TE    +  PL G     K G+   P  G++  I +  +G   +D+   G + +K P  S  +  WK      D++     G++ TGD   +D+DGY  ILGR   D++ V G++LS  EIE+ ++E   VAEC V+G  D   G AV+A +VL++++       + +  +++ L    +  + P+  P  + L D LP+   GK+ ++ L+  LA +
Sbjct:  457 VDTYWQTESGSHLVTPLAGGVTPMKPGSASLPFFGIETVILDPTTGEEINDSHAEGVLAIKRPWPSFARTIWKNHDRFLDTYLNPYKGYYFTGDGAARDKDGYIWILGRVD-DVVNVSGHRLSTAEIEAAIIEDRMVAECAVVGFNDDLTGQAVAAFVVLKDKSTWASASEEELQDIKKHLILTVRKDIGPFAAPKLIVLVDDLPKTRSGKIMRRILRKILAGE 679          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_PYRAE (Acetyl-coenzyme A synthetase OS=Pyrobaculum aerophilum GN=acsA PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.155e-20
Identity = 62/191 (32.46%), Postives = 97/191 (50.79%), Query Frame = -2
Query:  272 KAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSP--SLFKEYWKLPKVTKDSFTA--DGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 829
            K GT G PLPG +V + ++       GV G + +K P   +    W  P+    ++ +   G F  GD   +D+DGY  +LGR   +++KV G++L   E+ES L+ HPAVAE  V+G+PD   G+   A +VL++      E  K      EL    +  + P   P ++F    LP+   GK+ ++ LK
Sbjct:  450 KPGTNGPPLPGFEVDVVDENGNPAPPGVKGYLVIKKPWPGMLHGIWGDPERYIKTYWSRFPGMFYAGDYAIKDKDGYIWVLGRAD-EVIKVAGHRLGTYELESALISHPAVAESAVVGVPDAIKGEVPIAFVVLKQGVAPSDELRK------ELREHVRRTIGPIAEPAQIFFVTKLPKTRSGKIMRRLLK 633          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACSA_THIDA1.085e-2030.53Acetyl-coenzyme A synthetase OS=Thiobacillus denit... [more]
4CL3_ORYSJ1.085e-2028.70Probable 4-coumarate--CoA ligase 3 OS=Oryza sativa... [more]
ACSA_LARHH1.416e-2029.87Acetyl-coenzyme A synthetase OS=Laribacter hongkon... [more]
MENE_BACP21.850e-2033.952-succinylbenzoate--CoA ligase OS=Bacillus pumilus... [more]
ACSA_RUBXD1.850e-2029.63Acetyl-coenzyme A synthetase OS=Rubrobacter xylano... [more]
ACSA_BURP81.850e-2031.30Acetyl-coenzyme A synthetase OS=Burkholderia phyma... [more]
ACSA_NITEU2.416e-2029.03Acetyl-coenzyme A synthetase OS=Nitrosomonas europ... [more]
ACSA_NITEC2.416e-2028.19Acetyl-coenzyme A synthetase OS=Nitrosomonas eutro... [more]
ACS1_CANGA2.416e-2029.46Acetyl-coenzyme A synthetase 1 OS=Candida glabrata... [more]
ACSA_PYRAE3.155e-2032.46Acetyl-coenzyme A synthetase OS=Pyrobaculum aeroph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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