CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACS1_KLULA (Acetyl-coenzyme A synthetase 1 OS=Kluyveromyces lactis GN=ACS1 PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 3.155e-20
Identity = 65/224 (29.02%), Postives = 112/224 (50.00%), Query Frame = -2
Query:  254 LERYGMTEFVMAISNPLRGAR---KAGTVGNPLPGVQVKIAE-----DESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQE-LCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ Y  TE    +  PL G     K G    P  G+ + + +     +++G  A GV  I    PS  +  WK      D++     G++ TGD   +D+DG++ ILGR   D++ V G++LS  EIE+ ++E   VAEC V+G  D+  G AV+A +VL+ ++         +  +++ L    +  + P+  P  + L D LP+   GK+ ++ L+  LA +
Sbjct:  460 VDTYWQTESGSHLVTPLAGGATPMKPGAAAFPFFGIDLAVLDPTTGIEQTGEHAEGVLAIKRPWPSFARTIWKNNDRFLDTYLKPYPGYYFTGDGVARDKDGFFWILGRVD-DVVNVSGHRLSTAEIEAAIIEDDMVAECAVVGFNDELTGQAVAAFVVLKNKSSLTAASESELQDIKKHLIITVRKDIGPFAAPKLIVLVDDLPKTRSGKIMRRILRKILAGE 682          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACS1_CANAL (Acetyl-coenzyme A synthetase 1 OS=Candida albicans GN=ACS1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.155e-20
Identity = 69/224 (30.80%), Postives = 115/224 (51.34%), Query Frame = -2
Query:  251 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-----SDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSL-QELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 892
            ++ Y  TE    +  PL G    K G+   P  GV  KI +  +G     +D  GV  I    PS+ +  +       D++ A    ++ +GD   +D DG+Y ILGR   D++ V G++LS  EIE+ L+EHP V E  V+G  D+  G AV+A + L    K+D+   + V ++ +E+    + ++ P+  P  + L D LP+   GK+ ++ L+  LA ++
Sbjct:  430 VDTYWQTESGSHLLTPLAGITPTKPGSASLPFFGVDPKILDPTTGEELPDNDVEGVLAIKSAWPSITRGIYNDYNRFIDTYLAPYANYYFSGDGAARDRDGFYWILGRVD-DVVNVSGHRLSTAEIEAALIEHPIVGESAVVGYADELTGQAVAAYVSL----KKDKAVGEDVENIKKEMILTVRKEIGPFAAPKMILLVDDLPKTRSGKIMRRILRKVLAGEE 648          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACS2A_HUMAN (Acyl-coenzyme A synthetase ACSM2A, mitochondrial OS=Homo sapiens GN=ACSM2A PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.121e-20
Identity = 68/227 (29.96%), Postives = 106/227 (46.70%), Query Frame = -2
Query:  266 MQQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSP-----SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 928
            ++ W   TG    E YG TE  +          K G +G       V+I +D+      G  G+I ++        +F  Y   P  T  +   D F+  GD G +DEDGY+  +GR + DI+   GY++   E+E+ L+EHPAV E  V+  PD   G+ V A +VL  +         P    +EL    K   APYK P ++    +LP+   GK+ + +L+++
Sbjct:  346 LENWRAQTGLDIRESYGQTETGLTCMVSKTMKIKPGYMGTAASCYDVQIIDDKGNVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGD-FWLLGDRGIKDEDGYFQFMGRAN-DIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPVRGEVVKAFVVLASQFL----SHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDK 566          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CL_PINTA (4-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.121e-20
Identity = 62/221 (28.05%), Postives = 117/221 (52.94%), Query Frame = -2
Query:  254 FLERYGMTEFVMAISNPLRGAR-----KAGTVGNPLPGVQVKIAEDESGSDAAG--VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 895
            F + YGMTE    ++  L  A+     K+G+ G  +   Q+KI + E+G        GEIC++ P + K Y   P+ T  +   +G+  TGD    D+D    I+ R   +I+K  G++++  E+E++L+ HP++A+  V+    ++ G+   A +V   E           +S QE+  +   ++  YK   R++  D++P++  GK+ +K+L+++LAA+
Sbjct:  329 FGQGYGMTEAGPVLAMNLAFAKNPFPVKSGSCGTVVRNAQIKILDTETGESLPHNQAGEICIRGPEIMKGYINDPESTAATIDEEGWLHTGDVEYIDDDEEIFIVDRVK-EIIKYKGFQVAPAELEALLVAHPSIADAAVVPQKHEEAGEVPVAFVVKSSE-----------ISEQEIKEFVAKQVIFYKKIHRVYFVDAIPKSPSGKILRKDLRSRLAAK 537          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 5.382e-20
Identity = 62/213 (29.11%), Postives = 112/213 (52.58%), Query Frame = -2
Query:  275 RFLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGV---GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 898
            + L+ YG+TE     ++       ++ G  G   P V+ KI + ++G    GV   GE+ ++SP++ K Y+K  + T  +  ++G+ KTGD    D DG+  ++ R   +++K  GY+++  E+E++LL HP +A+  V+ +PD   G    A IV          K    LS  E+  +   +++PYK   ++    S+P+N  GK+ ++EL
Sbjct:  356 KILQGYGLTESTAIAASMFNKEETKRYGASGLLAPNVEGKIVDPDTGR-VLGVNQTGELWIRSPTVMKGYFKNKEATASTIDSEGWLKTGDLCYIDGDGFVFVVDRLK-ELIKCNGYQVAPAELEALLLAHPEIADAAVIPIPDMKAGQYPMAYIV---------RKVGSNLSESEIMGFVAKQVSPYKKIRKVTFLASIPKNPSGKILRREL 557          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: DHBE_BACSU (2,3-dihydroxybenzoate-AMP ligase OS=Bacillus subtilis GN=dhbE PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 7.030e-20
Identity = 59/190 (31.05%), Postives = 102/190 (53.68%), Query Frame = -2
Query:  260 TVGNPL-PGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDK-LAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLA 820
            T G P+ P  ++++ +D       G  G +  + P   + Y+K  +    SFT DGF++TGD  +   DGY ++ GR    I + GG K++A E+E+ LL HPAV +  ++ +PD+  G+     I+  +EA +            EL  + +++ LA YK+P R+   +S P+  +GKV+KK L+  ++
Sbjct:  352 TQGKPMSPYDEMRVWDDHDRDVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINR-GGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEAPK----------AAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAIS 530          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_RALPJ (Acetyl-coenzyme A synthetase OS=Ralstonia pickettii (strain 12J) GN=acsA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.030e-20
Identity = 68/219 (31.05%), Postives = 116/219 (52.97%), Query Frame = -2
Query:  269 LERYGMTEFVMAISNPLRGARKA--GTVGNPLPGVQVKIAEDESGSDAA-GVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQDED-GYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 892
            ++ +  TE    +  PL GA     G+   PLPG+   +  DE+G D   G G I V     PS+ +  W  P+  K S+  +      +  GD   +D+D GY+ I+GR   D++ V G+++  +EIES L+ +P VAE  V+G PD   G+A+ A +VL + ++ D +++K + +  EL  W   ++ P   P  +   D+LP+   GK+ ++ L++
Sbjct:  420 VDTFWQTETGGHMMTPLPGATPLVPGSCTLPLPGIMAAVV-DETGHDVPNGQGGILVVKRPWPSMIRTIWGDPERFKKSYFPEELGGKLYLAGDGSIRDKDTGYFTIMGRID-DVLNVSGHRMGTMEIESALVANPIVAEAAVVGRPDDMTGEAICAFVVL-KRSRPDGDEAKQIAN--ELRNWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRS 633          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_PYRAR (Acetyl-coenzyme A synthetase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=acsA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.030e-20
Identity = 61/191 (31.94%), Postives = 97/191 (50.79%), Query Frame = -2
Query:  272 KAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSP--SLFKEYWKLPKVTKDSFTA--DGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 829
            K GT G PLPG +V + ++       GV G + +K P   +    W  P+    ++ +   G F  GD   +D+DGY  +LGR   +++KV G++L   E+ES  + HPAVAE  V+G+PD   G+   A +VL++     +E  K      EL    +  + P   P ++F    LP+   GK+ ++ LK
Sbjct:  450 KPGTNGPPLPGFEVDVVDENGNPVPPGVKGYLVIKKPWPGMLHGIWGDPERYVKTYWSRFPGMFYVGDYAIKDKDGYIWVLGRAD-EVIKVAGHRLGTYELESAFVAHPAVAEAAVVGVPDAIKGEVPIAFVVLKQGVTPTEELRK------ELREHIRKSIGPIAEPAQIFFVTKLPKTRSGKIMRRLLK 633          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_LISIN (2-succinylbenzoate--CoA ligase OS=Listeria innocua GN=menE PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 9.181e-20
Identity = 70/211 (33.18%), Postives = 106/211 (50.24%), Query Frame = -2
Query:  266 LERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 892
            ++ +GMTE    I    P     K G+ G  L   +VKIA+D         GEI +K PS+   Y    K T  +F  DG+FKTGD G  DE+G+  +L R S D++  GG  +   EIE V+  + AV E  V+G  D  +G    A IV+ E              L+++C   +  LA +K+P ++ + + LP+ A GK+ + +LK +
Sbjct:  276 VQSFGMTETASQIVTLPPKDALNKIGSSGKALFPAEVKIADD---------GEILLKGPSITPGYLHNEKATAKAFI-DGWFKTGDIGYLDEEGFLFVLERRS-DLIISGGENIYPTEIEHVIGAYEAVEEVAVVGKSDAKWGSVPVAFIVVNEGFDEG--------VLKDIC---QTNLASFKIPKQITIVEHLPKTASGKIQRNKLKER 464          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_SYNFM (Acetyl-coenzyme A synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=acsA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.181e-20
Identity = 69/225 (30.67%), Postives = 111/225 (49.33%), Query Frame = -2
Query:  239 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKS--PSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ*FNL 892
            ++ +  TE    +  PL GA   K G+   P  GVQ  I + E    D  G G + +K   P + +  +   +  K ++ ++  G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ HPAVAE  V+G P    G  + A + L+   +   E        QEL  W + ++ P   P  +     LP+   GK+ ++ L+ ++AA +  NL
Sbjct:  406 VDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPAIIDPEGKMLDGPGSGYLIIKESWPGMLRTVYGDHERFKQTYFSNYPGLYFTGDGARRDEDGYYWITGRVD-DVINVSGHRLGTAEVESALVAHPAVAESAVVGFPHDIKGQGIYAYVTLKANWEHSDELR------QELVKWVRKEIGPIATPDYIQWAPGLPKTRSGKIMRRILR-KIAANEIDNL 622          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACS1_KLULA3.155e-2029.02Acetyl-coenzyme A synthetase 1 OS=Kluyveromyces la... [more]
ACS1_CANAL3.155e-2030.80Acetyl-coenzyme A synthetase 1 OS=Candida albicans... [more]
ACS2A_HUMAN4.121e-2029.96Acyl-coenzyme A synthetase ACSM2A, mitochondrial O... [more]
4CL_PINTA4.121e-2028.054-coumarate--CoA ligase OS=Pinus taeda GN=4CL PE=2... [more]
4CLL2_ARATH5.382e-2029.114-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
DHBE_BACSU7.030e-2031.052,3-dihydroxybenzoate-AMP ligase OS=Bacillus subti... [more]
ACSA_RALPJ7.030e-2031.05Acetyl-coenzyme A synthetase OS=Ralstonia picketti... [more]
ACSA_PYRAR7.030e-2031.94Acetyl-coenzyme A synthetase OS=Pyrobaculum arsena... [more]
MENE_LISIN9.181e-2033.182-succinylbenzoate--CoA ligase OS=Listeria innocua... [more]
ACSA_SYNFM9.181e-2030.67Acetyl-coenzyme A synthetase OS=Syntrophobacter fu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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