CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_COPCI (Acetyl-coenzyme A synthetase OS=Coprinopsis cinerea GN=ACS-1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.199e-19
Identity = 68/222 (30.63%), Postives = 109/222 (49.10%), Query Frame = -2
Query:  254 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESG-----SDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ +  TE    +  P  GA   K G    P  G++  I E  +G     +D  GV  I    PS+ +  +   +   +++     G+F TGD   +DEDGY  I GR   D++ V G++LS  EIES L+ H  VAE  V+G  D+  G AV A + L+ E K D E    +   +EL    +  + P+  P R+++   LP+   GK+ ++ L+  +A +
Sbjct:  416 VDTFWQTETGSIVVTPFPGAIETKPGAATVPFFGIEPAILEPTTGKVLEGNDVEGVLTIAHPWPSIARTIYGDHQRYLETYMKPYPGYFYTGDGAARDEDGYIWIKGRVD-DVINVSGHRLSTAEIESALITHTGVAETAVIGTADELTGQAVYAFVTLKPEFKFDAENEAGL--SKELILQVRKIIGPFAAPKRIYIVSDLPKTRSGKIMRRILRKIVAGE 634          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_COPC7 (Acetyl-coenzyme A synthetase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=ACS-1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.199e-19
Identity = 68/222 (30.63%), Postives = 109/222 (49.10%), Query Frame = -2
Query:  254 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESG-----SDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ +  TE    +  P  GA   K G    P  G++  I E  +G     +D  GV  I    PS+ +  +   +   +++     G+F TGD   +DEDGY  I GR   D++ V G++LS  EIES L+ H  VAE  V+G  D+  G AV A + L+ E K D E    +   +EL    +  + P+  P R+++   LP+   GK+ ++ L+  +A +
Sbjct:  416 VDTFWQTETGSIVVTPFPGAIETKPGAATVPFFGIEPAILEPTTGKVLEGNDVEGVLTIAHPWPSIARTIYGDHQRYLETYMKPYPGYFYTGDGAARDEDGYIWIKGRVD-DVINVSGHRLSTAEIESALITHTGVAETAVIGTADELTGQAVYAFVTLKPEFKFDPENEAGL--SKELILQVRKIIGPFAAPKRIYIVSDLPKTRSGKIMRRILRKIVAGE 634          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BURTA (Acetyl-coenzyme A synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=acsA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.566e-19
Identity = 70/228 (30.70%), Postives = 110/228 (48.25%), Query Frame = -2
Query:  269 WETITGHRFLERYGMTEFVMAISNPLRGARKA--GTVGNPLPGVQVKIAEDESGSDAA-GVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGD-TGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 919
            W+T TG   +              PL GA     G+   PLPG+   +  DE+G D   G G I V     P++ +  W  P+  K S+  D      +  GD T +  E GY+ I+GR   D++ V G++L  +EIES L+ H  VAE  V+G PD   G+AV A +VL+      +E +    +L++   W   ++ P   P  +   D+LP+   GK+ ++ L++
Sbjct:  424 WQTETGGHMI-------------TPLPGATPTVPGSCTLPLPGIMAAVV-DETGQDVPNGQGGILVVKRPWPAMARTIWGDPERFKKSYFPDELGGRLYLAGDGTVRDKETGYFTIMGRID-DVLNVSGHRLGTMEIESALVSHELVAEAAVVGRPDDTTGEAVVAFVVLKRSRPEGEEAAALAKTLRD---WVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRS 633          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.566e-19
Identity = 59/216 (27.31%), Postives = 115/216 (53.24%), Query Frame = -2
Query:  263 ERYGMTE---FVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAG--VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 889
            E YG+TE     +   +P +G    K  +VG  LP ++VK  + ++G        GE+CV+S  + + Y+   + T  +    G+  TGD G  D+DG   I+ R   +++K  G++++  E+E++LL HP+V +  V+ LPD++ G+  +A +V+  +A   +E         ++  +    +A YK    +   DS+P++  GK+ ++ L++++
Sbjct:  331 EAYGLTEHSCITLTHGDPEKGQGIAKRNSVGFILPNLEVKFIDPDTGRSLPKNTSGELCVRSQCVMQGYFMNKEETDKTIDEQGWLHTGDIGYIDDDGDIFIVDRIK-ELIKYKGFQVAPAELEAILLTHPSVEDVAVVPLPDEEAGEIPAACVVINPKATEKEE---------DILNFVAANVAHYKKVRAVHFVDSIPKSLSGKIMRRLLRDKI 536          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LUCI_LUCCR (Luciferin 4-monooxygenase OS=Luciola cruciata PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.045e-19
Identity = 64/210 (30.48%), Postives = 107/210 (50.95%), Query Frame = -2
Query:  263 YGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV--GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYK-LPTRLFLWDSLPRNAMGKVNKKELKNQL 883
            YG+TE   AI     G  K G  G  +P  + K+ + ++         GE+CVK P L K Y   P+ TK+    +G+  TGD G  DE+ ++ I+ R  + ++K  GY++   E+ESVLL+HP++ +  V G+PD   G+   A++VL E  K   EK        E+  +   +++  K L   +   D +P+   GK++ + ++  L
Sbjct:  342 YGLTETTSAIIITPEGDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKS-LIKYKGYQVPPAELESVLLQHPSIFDAGVAGVPDPVAGELPGAVVVL-ESGKNMTEK--------EVMDYVASQVSNAKRLRGGVRFVDEVPKGLTGKIDGRAIREIL 541          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_CUPTR (Acetyl-coenzyme A synthetase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=acsA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.045e-19
Identity = 68/219 (31.05%), Postives = 111/219 (50.68%), Query Frame = -2
Query:  269 LERYGMTEFVMAISNPLRGARKA--GTVGNPLPGVQVKIAEDESGSDAA-GVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQDED-GYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 892
            ++ +  TE    +  PL GA     G+   PLPG+   I  DE+G D   G G I V     P++ +  W  P+  K S+  +      +  GD   +D+D GY+ I+GR   D++ V G+++  +EIES L+ +P VAE  V+G PD   G+A+ A +VL+      +E +K      EL  W   ++ P   P  +   D+LP+   GK+ ++ L++
Sbjct:  420 VDTFWQTETGGHMITPLPGATPLVPGSCTLPLPGIMAAIV-DETGHDVPNGSGGILVVKRPWPAMIRTIWGDPERFKKSYFPEELGGKLYLAGDGSIRDKDTGYFTIMGRID-DVLNVSGHRMGTMEIESALVANPLVAEAAVVGRPDDMTGEAICAFVVLKRSRPSGEEAAK---LATELRNWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRS 633          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BURS3 (Acetyl-coenzyme A synthetase OS=Burkholderia sp. (strain 383) GN=acsA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.045e-19
Identity = 69/228 (30.26%), Postives = 111/228 (48.68%), Query Frame = -2
Query:  269 WETITGHRFLERYGMTEFVMAISNPLRGARKA--GTVGNPLPGVQVKIAEDESGSDAA-GVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQDED-GYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 919
            W+T TG   +              PL GA     G+   PLPG+   +  DE+G D   G G I V     P++ +  W  P+  K S+  +      +  GD   +D+D GY+ I+GR   D++ V G++L  +EIES L+ H  VAE  V+G PD   G+AV A +VL+      +E +    +L++   W   ++ P   P  +   D+LP+   GK+ ++ L++
Sbjct:  424 WQTETGGHMI-------------TPLPGATPTVPGSCTLPLPGIMAAVV-DETGQDVPNGQGGILVVKRPWPAMIRTIWGDPERFKKSYYPEELGGRLYLAGDGTVRDKDTGYFTIMGRID-DVLNVSGHRLGTMEIESALVSHELVAEAAVVGRPDDTTGEAVVAFVVLKRSRPEGEEAAALAKTLRD---WVGKQIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRS 633          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_OCEIH (2-succinylbenzoate--CoA ligase OS=Oceanobacillus iheyensis GN=menE PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.671e-19
Identity = 69/207 (33.33%), Postives = 106/207 (51.21%), Query Frame = -2
Query:  275 ERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 889
            + YGMTE    I    P    +K G+ G PL   Q+KIA +E+  +   +GEI VK P + K Y+K  +  K+ F  + +  TGD G  DE GY  ++ R + D++  GG  +   EIE+VL++   + E  V G P++++G    A IV           S+P+ S  E+    +  LA YK P  + + + LPRNA  K+ +  L
Sbjct:  287 QSYGMTETSSQIVTLTPEDALKKIGSAGKPLFPAQLKIAHNENNPNQ--IGEILVKGPMVTKGYYKRAETNKEVF-ENNWLHTGDMGYLDEQGYLYVVDRRN-DLIISGGENIYPSEIENVLVQIEGIEEAGVKGSPNEEWGMVPIAFIVC----------SRPI-SENEIAAHLEKYLAKYKRPKEIHVVNELPRNAANKLVRHNL 478          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SHIF8 (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella flexneri serotype 5b (strain 8401) GN=caiC PE=3 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 2.671e-19
Identity = 56/169 (33.14%), Postives = 95/169 (56.21%), Query Frame = -2
Query:  413 GHRFLERYGMTEFVMAI-SNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEK 904
            G R L  YGMTE ++ I  +     R+  ++G      + +I +D +    AG +GEIC+K     ++FKEY+  PK T     ADG+  TGDTG +DE+G++  + R   +++K GG  +S +E+E+++  HP + +  V+G+ D    +A+ A +VL E     +E+
Sbjct:  312 GVRLLTSYGMTETIVGIIGDRPSDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEE 479          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_RALME (Acetyl-coenzyme A synthetase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=acsA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.671e-19
Identity = 69/219 (31.51%), Postives = 109/219 (49.77%), Query Frame = -2
Query:  269 LERYGMTEFVMAISNPLRGARKA--GTVGNPLPGVQVKIAEDESGSDAA-GVGEICVKS---PSLFKEYWKLPKVTKDSFTADGF----FKTGDTGKQD-EDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 892
            ++ +  TE    +  PL GA     G+   PLPG+   I  DE+G D   G G I V     PS+ +  W  P+  K S+  +      +  GD   +D E GY+ I+GR   D++ V G+++  +EIES L+ +P VAE  V+G PD   G+A+ A +VL+      +E  K      EL  W   ++ P   P  +   D+LP+   GK+ ++ L++
Sbjct:  420 VDTFWQTETGGHMITPLPGATPLVPGSCTLPLPGIMAAIV-DETGQDVPNGNGGILVVKRPWPSMIRTIWGDPERFKKSYYPEELGGKLYLAGDGSIRDKETGYFTIMGRID-DVLNVSGHRMGTMEIESALVSNPIVAEAAVVGRPDDTTGEAICAFVVLKRSRPTAEEAVK---IAAELRNWVGKEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRS 633          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACSA_COPCI1.199e-1930.63Acetyl-coenzyme A synthetase OS=Coprinopsis cinere... [more]
ACSA_COPC71.199e-1930.63Acetyl-coenzyme A synthetase OS=Coprinopsis cinere... [more]
ACSA_BURTA1.566e-1930.70Acetyl-coenzyme A synthetase OS=Burkholderia thail... [more]
4CLL1_ARATH1.566e-1927.314-coumarate--CoA ligase-like 1 OS=Arabidopsis thal... [more]
LUCI_LUCCR2.045e-1930.48Luciferin 4-monooxygenase OS=Luciola cruciata PE=1... [more]
ACSA_CUPTR2.045e-1931.05Acetyl-coenzyme A synthetase OS=Cupriavidus taiwan... [more]
ACSA_BURS32.045e-1930.26Acetyl-coenzyme A synthetase OS=Burkholderia sp. (... [more]
MENE_OCEIH2.671e-1933.332-succinylbenzoate--CoA ligase OS=Oceanobacillus i... [more]
CAIC_SHIF82.671e-1933.14Probable crotonobetaine/carnitine-CoA ligase OS=Sh... [more]
ACSA_RALME2.671e-1931.51Acetyl-coenzyme A synthetase OS=Ralstonia metallid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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