CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: YTCI_BACSU (Uncharacterized acyl--CoA ligase ytcI OS=Bacillus subtilis GN=ytcI PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.013e-26 Identity = 76/216 (35.19%), Postives = 111/216 (51.39%), Query Frame = -2 Query: 266 GHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICV--KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 904 G + + YG TE + + K G++G P PG QV+I ++ G VG+I V +P+LFKEY+K P+ K D +F TGD ++DE+GY+ R DI+ GY + E+E L++HP V EC V+ PD+ G V A +VL+ KR E K L K APYK P + +SLP+ A K+ + EL+ + Sbjct: 312 GIKVRDGYGQTESTLLVGVLKDTPIKPGSMGKPTPGNQVEIINEDGEICKPGEVGDIAVHLSTPALFKEYFKDPERMKTQIRGD-YFLTGDRARKDEEGYFWFESRND-DIIISSGYTIGPFEVEDALVKHPEVKECAVVASPDEIRGSIVKAYVVLQNHEKRSDELVK------MLQNHVKTITAPYKYPREIEFVESLPKTASAKIRRVELRKR 519
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_GEOKA (2-succinylbenzoate--CoA ligase OS=Geobacillus kaustophilus GN=menE PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.323e-26 Identity = 75/208 (36.06%), Postives = 113/208 (54.33%), Query Frame = -2 Query: 272 ERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889 + YGMTE I+ P K G+ G PL ++ I +D + GEI VK P++ K YW+ P+ T + G+F TGD G DEDG+ +L R S D++ GG + E+E+VLL HP V E V G+ ++ +G A + L+ A D+ +L+ C +++LA YK+P R++ D LPRNA K+ ++ELK Sbjct: 284 QTYGMTETASQIATLAPEYSLTKLGSAGKPLFPAELCILKDGKPAAPHEAGEIVVKGPNVTKGYWQRPEATAQAIRG-GWFFTGDIGYLDEDGFLYVLDRRS-DLIISGGENVYPAEVEAVLLSHPDVEEAGVTGVENETWGQVPYAFVRLKRGASPDE------AALRAFC---RERLAKYKVPARIYFVDELPRNAAQKLLRRELK 480
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.727e-26 Identity = 75/217 (34.56%), Postives = 119/217 (54.84%), Query Frame = -2 Query: 263 GHRFLERYGMTEFV-MAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSD--AAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 904 G LE YG++E + NP RK G++G + V+ K+ D G + A VGE+ VK P++ K Y+K+P T+ + DG+ TGD ++DEDGY+ I+ R D++ VGGY + E+E VL HP V E V+G+PD G+AV +V + +++ + + C + LA YK P + D +P+NA GK+ ++ L++ L Sbjct: 308 GVTILEGYGLSEASPVTCFNPFDRGRKPGSIGTSILHVENKVV-DPLGRELPAHQVGELIVKGPNVMKGYYKMPMETEHALK-DGWLYTGDLARRDEDGYFYIVDRKK-DMIIVGGYNVYPREVEEVLYSHPDVKEAVVIGVPDPQSGEAVKGYVVPKRSGVTEED-------IMQHC---EKHLAKYKRPAAITFLDDIPKNATGKMLRRALRDIL 511
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALTY (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella typhimurium GN=caiC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.727e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAKALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALPC (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi C (strain RKS4594) GN=caiC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.727e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAGALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALHS (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella heidelberg (strain SL476) GN=caiC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.727e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAKALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALCH (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella choleraesuis GN=caiC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.727e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATAGALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_CITK8 (Probable crotonobetaine/carnitine-CoA ligase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.727e-26 Identity = 70/216 (32.41%), Postives = 122/216 (56.48%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G P + I ++++ S AG +GEIC+K ++FKEY+ P+ T + A+G+ TGD+G +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E L+ +E + + +A +K+P+ L + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEADIRDEQNRSLPAGEIGEICIKGVPGKTIFKEYYARPEATAKALEANGWLHTGDSGYRDEEGFFYFVDR-RCNMIKRGGENVSCIELENIISAHPKIQDIVVIGIHDSIRDEAIKAFVVLNE---------GETLTEEEFFAFCEQNMAKFKVPSFLEIRNDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALTI (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella typhi GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALSV (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella schwarzengrund (strain CVM19633) GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |