CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALPK (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALPB (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALPA (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella paratyphi A GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALNS (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella newport (strain SL254) GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALEP (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella enteritidis PT4 (strain P125109) GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALDC (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella dublin (strain CT_02021853) GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALA4 (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella agona (strain SL483) GN=caiC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.256e-26 Identity = 72/216 (33.33%), Postives = 120/216 (55.56%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D++ AG +GEIC+K ++FKEY+ P+ T + +G+ TGD+G QDEDGY+ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A IVL E LS E ++ ++ +A +K+P+ + + LPRN GK+ KK LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFSYEAEIRDDQNRPLPAGEIGEICIKGIPGKTIFKEYYMQPEATARALEPEGWLHTGDSGYQDEDGYFYFVDR-RCNMIKRGGENVSCVELENIISAHPKIQDIVVVGIKDAIRDEAIKAFIVLNE---------GETLSEAEFFSFCENNMAKFKVPSFMEIRTDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO81 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O81 (strain ED1a) GN=caiC PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.848e-26 Identity = 72/216 (33.33%), Postives = 118/216 (54.63%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEICDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSM (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 5.026e-26 Identity = 72/216 (33.33%), Postives = 118/216 (54.63%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SHIDS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiC PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 6.564e-26 Identity = 72/216 (33.33%), Postives = 119/216 (55.09%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAI-SNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I + L R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRLGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVLGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKVLPRNCSGKIIRKNLK 517 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |