CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRAJA (Acetyl-coenzyme A synthetase OS=Bradyrhizobium japonicum GN=acsA PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.517e-14
Identity = 59/214 (27.57%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGARKA--GTVGNPLPGVQVKIAE-DESGSDAAGVGEICVKS--PSLFKE-YWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA K   G+   P  GV  +I + D    +    G +C+    P + +  Y    +  +  F T  G + TGD  ++D DGYY I GR   D++ V G+++   E+ES L+ H  V+E  V+G P    G  + A + L    +  ++  K      EL TW + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  407 VDTWWQTETGGILITPLPGATKLKPGSATQPFFGVVPEIVDADGKVLEGETTGNLCLTRAWPGMMRTVYGDHARFEQTYFSTYKGKYFTGDGCRRDADGYYWITGRVD-DVINVSGHRMGTAEVESALVAHEKVSEAAVVGFPHDIKGQGIYAYVTLMAGVQPTEDLRK------ELVTWVRKEIGPIASPDQIQFAPGLPKTRSGKIMRRILR 613          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL7_ORYSJ (4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp. japonica GN=4CLL7 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.517e-14
Identity = 51/189 (26.98%), Postives = 95/189 (50.26%), Query Frame = -2
Query:  263 GTVGNPLPGVQVKIAEDESGSD--AAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 823
            G+ G     V+VKI +  +G    A   GE+ V+ P++   Y    +    +F ++G+ KTGD    D+DG+  ++ R   +++K   Y++   E+E VL   P + +  V+  P ++ G    A++V +  +K         L+  E+      ++APYK   ++   DS+P++  GK+ ++EL N L
Sbjct:  372 GSAGRVTENVEVKIVDHVTGKPLPAGQQGELWVRGPAVMTGYVGDNEANATTFNSEGWLKTGDLCYIDQDGFLFVVDRLK-ELIKYKAYQVPPAELELVLHSLPQIVDAAVMPYPHEEAGQIPVALVVKQPGSK---------LTEAEVMYNVAKQVAPYKKIRKVLFVDSIPKSPSGKILRRELVNHL 550          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: PPSB_BACSU (Plipastatin synthase subunit B OS=Bacillus subtilis GN=ppsB PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 57/230 (24.78%), Postives = 107/230 (46.52%), Query Frame = -2
Query:  275 MQQWETITGHR-FLERYGMTEFVMAIS----NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTA------DGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 928
            +Q W     H   +  YG+TE  + ++    +    A+    +G PL  +Q  + +        GV GE+ +    + + Y    ++T D F +      D  ++TGD  K+  +G    LGR    + KV G+++   EI++ LL++P + E  V+   D+    A+ A +V+         K +   ++ ++ T+ K+ L  + LP R+   DS+P    GK+++K L
Sbjct: 1773 LQSWNEKYPHTDLINMYGITETTVHVTFKKLSAADIAKNKSNIGRPLSTLQAHVMDAHMNLQPTGVPGELYIGGEGVARGYLNRDELTADRFVSNPYLPGDRLYRTGDLAKRLSNGELEYLGRIDEQV-KVRGHRIELGEIQAALLQYPMIKEAAVITRADEQGQTAIYAYMVI---------KDQQAANISDIRTYLKNALPDFMLPARMIQIDSIPVTVNGKLDQKAL 1992          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_XANAC (Acetyl-coenzyme A synthetase OS=Xanthomonas axonopodis pv. citri GN=acsA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 60/214 (28.04%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    + +PL GA   K G+   P  GVQ  + + E    + A  G + +    P   +  +   +   D++  T  G + TGD  ++D DGYY I GR   D++ V G+++   E+ES L+ HP VAE  V+G P    G  + A + L       ++  K      EL +W + ++ P   P  L     LP+   GK+ ++ L+
Sbjct:  409 VDTWWQTETGGILISPLAGAVDLKPGSATLPFFGVQPALVDAEGKILEGATEGNLVLLDSWPGQMRSVYGDHQRFIDTYFRTYPGSYFTGDGCRRDADGYYWITGRVD-DVINVSGHRIGTAEVESALVSHPKVAEAAVVGFPHDVKGQGIYAYVTLIAGQTPSEDLHK------ELVSWVRKEIGPIASPDHLQWAPGLPKTRSGKIMRRILR 615          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_PSE14 (Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=acsA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 62/223 (27.80%), Postives = 106/223 (47.53%), Query Frame = -2
Query:  254 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICV------KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ +  TE    + +PL GA   K G+   P  GV +    D  G+  + A  G + +      +S SL+ ++ +       +F   G + TGD  ++DEDGYY I GR   D++ V G+++   EIES ++ HP VAE  V+G+P    G  +   + L       +E S  + +  EL  W + ++ P   P  +     LP+   GK+ ++ L+    A+
Sbjct:  410 VDTWWQTETGGILISPLPGATALKPGSATRPFFGV-IPALVDNLGNLIEGAAEGNLVILDSWPGQSRSLYGDHDRFVDTYFKTFR--GMYFTGDGARRDEDGYYWITGRVD-DVLNVSGHRMGTAEIESAMVAHPKVAEAAVVGVPHDLKGQGIYVYVTL----NGGEEPSDALRT--ELRNWVRKEIGPIASPDFIQWAPGLPKTRSGKIMRRILRKIATAE 622          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_METSB (Acetyl-coenzyme A synthetase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=acsA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14
Identity = 61/217 (28.11%), Postives = 102/217 (47.00%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGV--GEICVKSP------SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    + +PL GA   K G+   P  GVQ ++  D +G    G   G + +         +LF ++ +  +    ++   G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  VAE  V+G P    G  + A + L    +  +E  K      EL +W +  + P   P  +     LP+   GK+ ++ L+
Sbjct:  408 VDTWWQTETGGILISPLPGATALKPGSATQPFFGVQPQVV-DAAGEVLEGPCSGNLVIADSWPAQMRTLFNDHERFVQAYFSAYP--GKYFTGDGCRRDEDGYYWITGRVD-DVINVSGHRLGTAEVESSLVAHIKVAEAAVVGYPHDLKGQGIYAYVTLMTGIEPSEELRK------ELVSWVRKDIGPIASPDIVHFAPGLPKTRSGKIMRRILR 614          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA2_RHIME (Acetyl-coenzyme A synthetase 2 OS=Rhizobium meliloti GN=acsA2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14
Identity = 61/214 (28.50%), Postives = 96/214 (44.86%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAE-DESGSDAAGVGEICVKSP---SLFKEYWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GVQ +I + D    D A  G +C+       +   Y    +  +  F T  G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + L      D E        Q L    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTETGGILITPLPGATDLKPGSATRPFFGVQPQIVDSDGKVVDGAADGNLCITDSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHNLVSEAAVVGYPHPIKGQGIYCYVSLMAGEVGDDELR------QALVKHVRSEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LGRB_BREPA (Linear gramicidin synthase subunit B OS=Brevibacillus parabrevis GN=lgrB PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 65/220 (29.55%), Postives = 105/220 (47.73%), Query Frame = -2
Query:  275 LERYGMTEFVMAISN---PLRGARK-AGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF--------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYG-DAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 892
            + +YG TE  +  +    P+ G R+ A T+G P+  V V + ++       GV GE+ +   SL + Y   P +T+ SF  + F        ++TGD  +   DG    +GR   D + + G+++   EIES L  HPAVAE  V+   D   G   + A  VL E  +R   + +  L         K+ L  Y +P+ + L ++LP    GKV+++ L
Sbjct: 1802 VNQYGPTENTVVATAGAVPVLGERESAPTIGRPIDNVSVYVLDENRQPVPVGVVGELYIGGKSLARGYRNRPDLTEASFVPNPFSPIEGARMYRTGDLVRYAADGSIEFIGRAD-DQVSIRGFRVELGEIESALYAHPAVAESVVIVREDVTPGVKRLVAYAVLHEGEERQTSELRQSL---------KEMLPDYMVPSAIVLMEALPLTPNGKVDRRAL 2011          

HSP 2 Score: 77.411 bits (189), Expect = 1.284e-13
Identity = 57/199 (28.64%), Postives = 95/199 (47.74%), Query Frame = -2
Query:  275 RGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF--------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLW-DSLPRNAMGKVNKKEL 841
            +GA+   T+G PL   Q  + + +      G+ GE+ +    L + Y K PK+T + F  + F        + TGD  +   DG    LGR    + K+ GY++   E+E+VL  HP + E  V+   DK     + A I  ++    D+           L +WAK KL  + +P+  F+W D++P    GK+++K+L
Sbjct: 3338 KGAKTEPTIGRPLANTQAYVLDAKLQPVPLGLPGELYLGGDGLARGYLKRPKMTAERFLPNPFHPDPDARMYSTGDLVRYLPDGQLEYLGRIDHQV-KIRGYRIELGELEAVLRSHPQIKEAVVVAKEDKLGEKRLVAYITTKDGECGDR---------AVLTSWAKAKLPEFMVPS-FFVWLDAMPLTPNGKIDRKQL 3525          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_VIBCH (Acetyl-coenzyme A synthetase OS=Vibrio cholerae GN=acsA PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 62/215 (28.84%), Postives = 95/215 (44.19%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSF------TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GVQ  +  D  G    G  E  +     +    +      D F      T  G + TGD  ++DEDGYY I GR   D++ V G+++   EIES L+    +AE  V+G+P    G A+ A I L +      E  K      E+  W + ++     P  L   D+LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTETGGILITPLPGATALKPGSATRPFFGVQPALV-DNMGEIVEGATEGNLVLLDSWPGQMRTVYGDHDRFEQTYFSTFKGMYFTGDGARRDEDGYYWITGRVD-DVLNVSGHRMGTAEIESALVAFNKIAEAAVVGVPHDIKGQAIYAYITLNDGVYPSAELHK------EVKDWVRKEIGAIATPDVLHWTDALPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_PSESM (Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. tomato GN=acsA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 61/223 (27.35%), Postives = 106/223 (47.53%), Query Frame = -2
Query:  254 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICV------KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ +  TE    + +PL GA   K G+   P  GV +    D  G+  + A  G + +      +S +L+ ++ +       +F   G + TGD  ++DEDGYY I GR   D++ V G+++   EIES ++ HP VAE  V+G+P    G  +   + L       +E S  + +  EL  W + ++ P   P  +     LP+   GK+ ++ L+    A+
Sbjct:  410 VDTWWQTETGGILISPLPGATALKPGSATRPFFGV-IPALVDNLGNLIEGAAEGNLVILDSWPGQSRTLYGDHDRFVDTYFKTFR--GMYFTGDGARRDEDGYYWITGRVD-DVLNVSGHRMGTAEIESAMVAHPKVAEAAVVGVPHDLKGQGIYVYVTL----NAGEEPSDALRT--ELRNWVRKEIGPIASPDFIQWAPGLPKTRSGKIMRRILRKIATAE 622          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACSA_BRAJA1.517e-1427.57Acetyl-coenzyme A synthetase OS=Bradyrhizobium jap... [more]
4CLL7_ORYSJ1.517e-1426.984-coumarate--CoA ligase-like 7 OS=Oryza sativa sub... [more]
PPSB_BACSU1.981e-1424.78Plipastatin synthase subunit B OS=Bacillus subtili... [more]
ACSA_XANAC1.981e-1428.04Acetyl-coenzyme A synthetase OS=Xanthomonas axonop... [more]
ACSA_PSE141.981e-1427.80Acetyl-coenzyme A synthetase OS=Pseudomonas syring... [more]
ACSA_METSB2.587e-1428.11Acetyl-coenzyme A synthetase OS=Methylocella silve... [more]
ACSA2_RHIME2.587e-1428.50Acetyl-coenzyme A synthetase 2 OS=Rhizobium melilo... [more]
LGRB_BREPA3.379e-1429.55Linear gramicidin synthase subunit B OS=Brevibacil... [more]
ACSA_VIBCH3.379e-1428.84Acetyl-coenzyme A synthetase OS=Vibrio cholerae GN... [more]
ACSA_PSESM3.379e-1427.35Acetyl-coenzyme A synthetase OS=Pseudomonas syring... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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