CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_CRYPV (Acetyl-coenzyme A synthetase OS=Cryptosporidium parvum GN=ACS PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 59/218 (27.06%), Postives = 105/218 (48.17%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICVKS--PSLFKEYWK---LPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKR--DQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ Y  TE    +  P+ G    K G+   P  G++  I + ++G   D  G G +C+K+  P +F+  +    L ++    F    ++ TGD   +D+DGY  I GR   D + V G++LS+ EIE  L  H  +AE   + +     G+A+   +VL++   R  D   S P     EL    + ++ P   P  + + +++P+   GKV ++ L+
Sbjct:  446 VDTYWQTETGGIVIAPIPGCFDTKPGSATFPFFGIEPAILDPDTGKEIDGPGSGVLCIKNSWPGMFRGIFGAHYLHEIYTKPFPK--YYFTGDGVLRDQDGYLWITGRID-DTINVSGHRLSSKEIEDALTNHFGIAEAAAVAIDHDVKGNALVCFVVLKDSGNRTFDLNNSSPHPFEYELRMCVRTQIGPVATPDHIIVVENIPKTRSGKVVRRLLR 660          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_CAMJJ (Acetyl-coenzyme A synthetase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=acsA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 61/227 (26.87%), Postives = 108/227 (47.58%), Query Frame = -2
Query:  272 WETITGHRFLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSP--SLFKEYWKLPKVTKDSFTA----DG--FFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919
            W+T TG   +              PL GA   K G    PLPG+  ++ ++E      G  G +C+  P  S+ +  W   +   +S+ +    DG   + +GD    D++GY  I GRT  D++ V G+++   EIES + +HP+VAE  V+ + D   G+++ A +VL   +  D      + +L+EL    + ++ P     ++     LP+   GK+ ++ L+
Sbjct:  414 WQTETGGHMI-------------TPLPGATPLKPGCATLPLPGIFAEVIDEEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFYDKNGYITITGRTD-DVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDTIKGESLFAFVVLSPASSCD--LGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR 624          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_CAMJE (Acetyl-coenzyme A synthetase OS=Campylobacter jejuni GN=acsA PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 61/227 (26.87%), Postives = 108/227 (47.58%), Query Frame = -2
Query:  272 WETITGHRFLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSP--SLFKEYWKLPKVTKDSFTA----DG--FFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919
            W+T TG   +              PL GA   K G    PLPG+  ++ ++E      G  G +C+  P  S+ +  W   +   +S+ +    DG   + +GD    D++GY  I GRT  D++ V G+++   EIES + +HP+VAE  V+ + D   G+++ A +VL   +  D      + +L+EL    + ++ P     ++     LP+   GK+ ++ L+
Sbjct:  414 WQTETGGHMI-------------TPLPGATPLKPGCATLPLPGIFAEVIDEEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFYDKNGYITITGRTD-DVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDTIKGESLFAFVVLSPASSCD--LGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR 624          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_CAMJ8 (Acetyl-coenzyme A synthetase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=acsA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 61/227 (26.87%), Postives = 108/227 (47.58%), Query Frame = -2
Query:  272 WETITGHRFLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSP--SLFKEYWKLPKVTKDSFTA----DG--FFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919
            W+T TG   +              PL GA   K G    PLPG+  ++ ++E      G  G +C+  P  S+ +  W   +   +S+ +    DG   + +GD    D++GY  I GRT  D++ V G+++   EIES + +HP+VAE  V+ + D   G+++ A +VL   +  D      + +L+EL    + ++ P     ++     LP+   GK+ ++ L+
Sbjct:  414 WQTETGGHMI-------------TPLPGATPLKPGCATLPLPGIFAEVIDEEGNKKDEGEDGLLCITKPWPSMIRGIWGNDERYIESYFSQAKKDGKAVYFSGDGAFYDKNGYITITGRTD-DVVNVAGHRIGTAEIESAIAKHPSVAESAVVSILDAIKGESLFAFVVLSPASSCD--LGGAIETLKELNDILRVEIGPIAKIEKILYTPGLPKTRSGKIMRRILR 624          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BARBK (Acetyl-coenzyme A synthetase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=acsA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 66/227 (29.07%), Postives = 110/227 (48.46%), Query Frame = -2
Query:  239 LERYGMTEFVMAISNPLRGARK--AGTVGNPLPGVQVKIAEDESGSDAAGV--GEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSL-QELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ*FNL 892
            L+ +  TE    I  PL GA K  AG+  +P  G+QV++  D  G+   G   G +C+    P   +  +   +   +++  T  G + TGD  K+D+D YY I GR   DI+ + G++L   EIES L+ HPAV+E  V+G P    G  + + + L          ++P  +L Q L    + ++       ++     LP+   GK+ ++ L+ ++AA    NL
Sbjct:  410 LDTWWQTETGGHIITPLPGATKLKAGSATHPFFGIQVQLV-DPQGNILKGEAEGNLCIVDSWPGQMRTLYNNHQRFVETYFSTYKGKYFTGDGCKRDKDSYYWITGRVD-DILNISGHRLGTAEIESALISHPAVSEAAVVGYPHPIKGQGIYSFVTL-------MAGTQPSATLHQNLIQHVRQEIGSIATLDKIQFAPHLPKTRSGKIMRRILR-KIAANNFDNL 626          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_AGRT5 (Acetyl-coenzyme A synthetase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=acsA PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 58/216 (26.85%), Postives = 101/216 (46.76%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICV------KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    + +PL GA   K G+   P  GVQ ++ + E    +    G +C+      +S S++ ++ +   V     T  G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + L      D          +EL    ++++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTETGGILISPLPGATDLKPGSATRPFFGVQPQLVDAEGNVLEGPADGNLCIIDSWPGQSRSVYGDHQRF--VDTYFSTYKGKYFTGDGCRRDEDGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHHQVSEAAVVGYPHPIKGQGIYCYVTLMAGQSGDYALR------EELVKHVRNEIGPVATPDKIQFAPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA1_PSEPK (Acetyl-coenzyme A synthetase 1 OS=Pseudomonas putida (strain KT2440) GN=acsA1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 62/217 (28.57%), Postives = 103/217 (47.47%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICV------KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    + +PL GA   K G+   P  GV V    D  G+  D A  G + +      +S SL+ ++ +       +F   G + TGD  ++DEDGYY I GR   D++ V G+++   EIES ++ H  VAE  V+G+P    G  +   + L    +  ++     L L EL  W + ++ P   P  +     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTETGGILISPLPGATGLKPGSATRPFFGV-VPALVDNLGNLIDGAAEGNLVILDSWPGQSRSLYGDHDRFVDTYFKTFR--GMYFTGDGARRDEDGYYWITGRVD-DVLNVSGHRMGTAEIESAMVAHSKVAEAAVVGVPHDIKGQGIYVYVTLNAGIEASEQ-----LRL-ELKNWVRKEIGPIASPDVIQWAPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACS2L_MOUSE (Acetyl-coenzyme A synthetase 2-like, mitochondrial OS=Mus musculus GN=Acss1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 55/197 (27.92%), Postives = 95/197 (48.22%), Query Frame = -2
Query:  254 GTVGNPLPGVQVKIAEDESGSDAAG---VGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 823
            G    P  G+ V +  DE G+   G    G +C+    P + +  +   +   D++     G++ TGD   + E GYY I GR   D++ + G++L   EIE  + +HPAV E  V+G P    G+A  A IVL++    +       + + EL      K+A Y +P ++ +   LP+   GKV ++ L+  + ++
Sbjct:  460 GMAMRPFFGI-VPVLMDEKGNVLEGGDVSGALCISQAWPGMARTIYGDHQRFVDAYFRAYPGYYFTGDGAHRTEGGYYQITGRMD-DVINISGHRLGTAEIEDAMADHPAVPETAVIGYPHDIKGEAAFAFIVLKDNISDEN------MVVNELKLSVATKIAKYAVPDQILVVKRLPKTRSGKVMRRLLRKIITSR 648          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSS3_MOUSE (Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Mus musculus GN=Acss3 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14
Identity = 54/189 (28.57%), Postives = 85/189 (44.97%), Query Frame = -2
Query:  275 GTVGNPLPGVQVKIAEDESGS-DAAGVGEICVK---SPSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 823
            G  G  +PG  V I +D      A  +G I VK    P  F   WK  +  K  +     G++ T D G  DE+GY  ++ R   D++ V G+++SA  IE  +L H  VA+C V+G  D   G    A+ VL+++    +E+      L+E+    +  + P            LP+   GK+ +  L
Sbjct:  468 GQAGKCVPGYNVMILDDNMQKLKARSLGNIVVKLPLPPGAFSGLWKNQEAFKHLYFEKFPGYYDTMDAGYMDEEGYLYVMSRVD-DVINVAGHRISAGAIEESVLSHGTVADCAVVGKEDPLKGHVPLALCVLKKDVNASEEQ-----VLEEIVKHVRQSIGPVAAFRNAVFVKQLPKTRSGKIPRSTL 650          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_RHISN (Acetyl-coenzyme A synthetase OS=Rhizobium sp. (strain NGR234) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14
Identity = 59/215 (27.44%), Postives = 100/215 (46.51%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKSP---SLFKEYWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAII-VLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+ +I ++E    D    G +C+       +   Y    +  +  F T  G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + ++  E   D+ +       QEL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTETGGILITPLPGATDLKPGSATRPFFGVKPQIVDNEGNVIDGPADGNLCITDSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHHLVSEAAVVGYPHPIKGQGIYCYVSLMAGEVGSDELR-------QELVKHVRSEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 616          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACSA_CRYPV3.379e-1427.06Acetyl-coenzyme A synthetase OS=Cryptosporidium pa... [more]
ACSA_CAMJJ3.379e-1426.87Acetyl-coenzyme A synthetase OS=Campylobacter jeju... [more]
ACSA_CAMJE3.379e-1426.87Acetyl-coenzyme A synthetase OS=Campylobacter jeju... [more]
ACSA_CAMJ83.379e-1426.87Acetyl-coenzyme A synthetase OS=Campylobacter jeju... [more]
ACSA_BARBK3.379e-1429.07Acetyl-coenzyme A synthetase OS=Bartonella bacilli... [more]
ACSA_AGRT53.379e-1426.85Acetyl-coenzyme A synthetase OS=Agrobacterium tume... [more]
ACSA1_PSEPK3.379e-1428.57Acetyl-coenzyme A synthetase 1 OS=Pseudomonas puti... [more]
ACS2L_MOUSE3.379e-1427.92Acetyl-coenzyme A synthetase 2-like, mitochondrial... [more]
ACSS3_MOUSE4.413e-1428.57Acyl-CoA synthetase short-chain family member 3, m... [more]
ACSA_RHISN4.413e-1427.44Acetyl-coenzyme A synthetase OS=Rhizobium sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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