CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: GRSB_ANEMI (Gramicidin S synthase 2 OS=Aneurinibacillus migulanus GN=grsB PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 60/189 (31.75%), Postives = 86/189 (45.50%), Query Frame = -2
Query:  275 TVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 820
            T+G PL  V V I          GV GE+C+    L + Y   P++T D F  + F      +KTGD  K   DG    +GR    + KV GY++   EIES +LE+  + E  V+          + A IV EE+          VL+L +L ++    L  Y +P      DS+P    GKV++K L
Sbjct: 3899 TIGRPLSNVDVYIVNCNHQLQPVGVVGELCIGGQGLARGYLNKPELTADKFVVNPFVPGERMYKTGDLAKWRSDGMIEYVGRVDEQV-KVRGYRIELGEIESAILEYEKIKEAVVMVSEHTASEQMLCAYIVGEED----------VLTL-DLRSYLAKLLPSYMIPNYFIQLDSIPLTPNGKVDRKAL 4075          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_PSEU2 (Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 61/223 (27.35%), Postives = 106/223 (47.53%), Query Frame = -2
Query:  254 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICV------KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ +  TE    + +PL GA   K G+   P  GV +    D  G+  + A  G + +      +S SL+ ++ +       +F   G + TGD  ++DEDGY+ I GR   D++ V G+++   EIES ++ HP VAE  V+G+P    G  +   + L       +E S  + +  EL  W + ++ P   P  +     LP+   GK+ ++ L+    A+
Sbjct:  410 VDTWWQTETGGILISPLPGATALKPGSATRPFFGV-IPALVDNLGNLIEGAAEGNLVILDSWPGQSRSLYGDHDRFVDTYFKTFR--GMYFTGDGARRDEDGYFWITGRVD-DVLNVSGHRMGTAEIESAMVAHPKVAEAAVVGVPHDLKGQGIYVYVTL----NGGEEPSDALRT--ELRNWVRKEIGPIASPDFIQWAPGLPKTRSGKIMRRILRKIATAE 622          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_HUMAN (Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo sapiens GN=ACSS2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 69/230 (30.00%), Postives = 104/230 (45.22%), Query Frame = -2
Query:  272 WETITGHRFLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSF------------TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919
            W+T TG   L              PL GA   K G+   P  GV   I  +ESG +  G  E  +    +FK+ W  P + +  +               G++ TGD  ++D+DGYY I GR   D++ V G+ LS  E+ES L+EH AVAE  V+G P    G+ +   + L      D     P L+ +EL    ++K+ P   P  +     LP+   GK+ ++ L+
Sbjct:  466 WQTETGGHML-------------TPLPGATPMKPGSATFPFFGVAPAIL-NESGEELEGEAEGYL----VFKQPW--PGIMRTVYGNHERFETTYFKKFPGYYVTGDGCQRDQDGYYWITGRID-DMLNVSGHLLSTAEVESALVEHEAVAEAAVVGHPHPVKGECLYCFVTL-----CDGHTFSPKLT-EELKKQIREKIGPIATPDYIQNAPGLPKTRSGKIMRRVLR 668          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRUSU (Acetyl-coenzyme A synthetase OS=Brucella suis GN=acsA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-SDAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+  + ++E    +    G +C+    P   +  +   K   +++  T  G + +GD  ++DEDGYY I GR   D++ + G++L   EIES L+ H +V+E  V+G P    G  +   + L   A    +   P    +EL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVD-DVLNISGHRLGTAEIESALVSHHSVSEAAVVGYPHPIKGQGIYCYVTLMTGA----DAQDPDELRKELVQHVRKEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 618          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRUSI (Acetyl-coenzyme A synthetase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-SDAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+  + ++E    +    G +C+    P   +  +   K   +++  T  G + +GD  ++DEDGYY I GR   D++ + G++L   EIES L+ H +V+E  V+G P    G  +   + L   A    +   P    +EL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVD-DVLNISGHRLGTAEIESALVSHHSVSEAAVVGYPHPIKGQGIYCYVTLMTGA----DAQDPDELRKELVQHVRKEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 618          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRUO2 (Acetyl-coenzyme A synthetase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-SDAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+  + ++E    +    G +C+    P   +  +   K   +++  T  G + +GD  ++DEDGYY I GR   D++ + G++L   EIES L+ H +V+E  V+G P    G  +   + L   A    +   P    +EL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVD-DVLNISGHRLGTAEIESALVSHHSVSEAAVVGYPHPIKGQGIYCYVTLMTGA----DAQDPDELRKELVQHVRKEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 618          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRUME (Acetyl-coenzyme A synthetase OS=Brucella melitensis GN=acsA PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-SDAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+  + ++E    +    G +C+    P   +  +   K   +++  T  G + +GD  ++DEDGYY I GR   D++ + G++L   EIES L+ H +V+E  V+G P    G  +   + L   A    +   P    +EL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVD-DVLNISGHRLGTAEIESALVSHHSVSEAAVVGYPHPIKGQGIYCYVTLMTGA----DAQDPDELRKELVQHVRKEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 618          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRUMB (Acetyl-coenzyme A synthetase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-SDAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+  + ++E    +    G +C+    P   +  +   K   +++  T  G + +GD  ++DEDGYY I GR   D++ + G++L   EIES L+ H +V+E  V+G P    G  +   + L   A    +   P    +EL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQECVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVD-DVLNISGHRLGTAEIESALVSHHSVSEAAVVGYPHPIKGQGIYCYVTLMTGA----DAQDPDELRKELVQHVRKEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 618          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRUC2 (Acetyl-coenzyme A synthetase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=acsA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-SDAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+  + ++E    +    G +C+    P   +  +   K   +++  T  G + +GD  ++DEDGYY I GR   D++ + G++L   EIES L+ H +V+E  V+G P    G  +   + L   A    +   P    +EL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVD-DVLNISGHRLGTAEIESALVSHHSVSEAAVVGYPHPIKGQGIYCYVTLMTGA----DAQDPDELRKELVQHVRKEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 618          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BRUAB (Acetyl-coenzyme A synthetase OS=Brucella abortus GN=acsA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESG-SDAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+  + ++E    +    G +C+    P   +  +   K   +++  T  G + +GD  ++DEDGYY I GR   D++ + G++L   EIES L+ H +V+E  V+G P    G  +   + L   A    +   P    +EL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTENGGILITPLPGATDLKPGSATRPFFGVKPVLVDNEGNVQEGVADGNLCISDSWPGQMRTVYGDHKRFIETYFSTYKGMYFSGDGCRRDEDGYYWITGRVD-DVLNISGHRLGTAEIESALVSHHSVSEAAVVGYPHPIKGQGIYCYVTLMTGA----DAQDPDELRKELVQHVRKEIGPIATPDKIQFAPGLPKTRSGKIMRRILR 618          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
GRSB_ANEMI5.764e-1431.75Gramicidin S synthase 2 OS=Aneurinibacillus migula... [more]
ACSA_PSEU25.764e-1427.35Acetyl-coenzyme A synthetase OS=Pseudomonas syring... [more]
ACSA_HUMAN5.764e-1430.00Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo ... [more]
ACSA_BRUSU5.764e-1426.17Acetyl-coenzyme A synthetase OS=Brucella suis GN=a... [more]
ACSA_BRUSI5.764e-1426.17Acetyl-coenzyme A synthetase OS=Brucella suis (str... [more]
ACSA_BRUO25.764e-1426.17Acetyl-coenzyme A synthetase OS=Brucella ovis (str... [more]
ACSA_BRUME5.764e-1426.17Acetyl-coenzyme A synthetase OS=Brucella melitensi... [more]
ACSA_BRUMB5.764e-1426.17Acetyl-coenzyme A synthetase OS=Brucella melitensi... [more]
ACSA_BRUC25.764e-1426.17Acetyl-coenzyme A synthetase OS=Brucella canis (st... [more]
ACSA_BRUAB5.764e-1426.17Acetyl-coenzyme A synthetase OS=Brucella abortus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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