CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_GEMAT (Acetyl-coenzyme A synthetase OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=acsA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.677e-13
Identity = 55/217 (25.35%), Postives = 96/217 (44.24%), Query Frame = -2
Query:  269 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSP--SLFKEYWKLPKVTKDSFTAD-----GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 892
            ++ +  TE    +  PL G    K G+   P PG++  + +  +     G G + +  P  S+ +  W   +   D++ +        +  GD  K DEDGY  ILGR   D++ V G+++  +E+ES L++HP+VAE  V+G      G A++A + L                  EL      K+     P  +     LP+   GK+ ++ L++
Sbjct:  414 VDTWWQTETGAIMITPLPGVTTTKPGSATVPFPGIRTALLDANANELTVGGGLLAITHPWPSMLRTIWGDDQRYVDTYFSKWPGRPDLYFPGDGAKLDEDGYLWILGRVD-DVLNVSGHRIGTMEVESALVDHPSVAEAAVVGKHHDLKGQAIAAFVTLRAGFTASGSLR------DELRDHVAQKIGALARPDDILFSADLPKTRSGKIMRRLLRD 623          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL9_ARATH (4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana GN=4CLL9 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.677e-13
Identity = 48/187 (25.67%), Postives = 92/187 (49.20%), Query Frame = -2
Query:  275 KAGTVGNPLPGVQVKIAEDESGSDA--AGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 829
            K G+VG     ++ KI +  +G        GE+ ++ P + K Y    K + ++   +G+ KTGD    D + +  I+ R   +++K   Y++  +E+E +L  +P V +  V+  PD+D G+   A IV          K    L+  ++  +   ++ PYK   R+   +++P+N  GK+ ++EL
Sbjct:  374 KYGSVGRISENMEAKIVDPSTGESLPPGKTGELWLRGPVIMKGYVGNEKASAETVDKEGWLKTGDLCYFDSEDFLYIVDRLK-ELIKYKAYQVPPVELEQILHSNPDVIDAAVVPFPDEDAGEIPMAFIV---------RKPGSNLNEAQIIDFVAKQVTPYKKVRRVAFINAIPKNPAGKILRREL 550          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_MOUSE (Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus GN=Acss2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.736e-13
Identity = 67/228 (29.39%), Postives = 105/228 (46.05%), Query Frame = -2
Query:  272 WETITGHRFLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWK-LPKVTKDSFTA---------DGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919
            W+T TG   L              PL GA   K G+   P  GV ++ + +ESG +  G  E  +    +FK+ W  + +    + T           G++ TGD  ++D+DGYY I GR   D++ V G+ LS  E+ES L+EH AVAE  V+G P    G+ +   + L      D     P L+ +EL    ++K+ P   P  +     L +   GK+ ++ L+
Sbjct:  466 WQTETGGHML-------------TPLPGATPMKPGSASFPFFGVALQ-SLNESGEELEGEAEGYL----VFKQPWPGIMRTVYGNHTRFETTYFKKFPGYYVTGDGCRRDQDGYYWITGRID-DMLNVSGHLLSTAEVESALVEHEAVAEAAVVGHPHPVKGECLYCFVTL-----CDGHTFSPTLT-EELKKQIREKIGPIATPDYIQNAPGLLKPRSGKIMRRVLR 668          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_AGRRH (Acetyl-coenzyme A synthetase OS=Agrobacterium rhizogenes GN=acsA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.736e-13
Identity = 53/216 (24.54%), Postives = 104/216 (48.15%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICV------KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  G++ ++ + E    + A  G +C+      ++ S++ ++ +  +    ++  +G + TGD  ++D DGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + L   ++  +E        Q+L    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTETGGIMITPLPGATDLKPGSATRPFFGIRPELVDAEGKLIEGAADGNLCIADSWPGQARSVYGDHERFIQTYFSTY--EGKYFTGDGCRRDADGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHHLVSEAAVVGYPHNIKGQGIYCYVTLMAGSEGSEELR------QQLVKHVRAEIGPIASPDKIQFAPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13
Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = -2
Query:  491 GHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIA--EDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLG 904
            G +F E YG TE        L G   AG VG P+P   +K+   ED +   A G GE+CVK  ++FK Y K P  T ++   DG+  TGD GK   +G   I+ R         G  ++  +IE++ L   AVA+  V G
Sbjct:  452 GCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYIKLVDVEDMNYQAAKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHG 591          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_AGRVS (Acetyl-coenzyme A synthetase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=acsA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.879e-13
Identity = 54/216 (25.00%), Postives = 105/216 (48.61%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICV------KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    + +PL GA   K G+   P  GV+ ++ ++E    + A  G +C+      ++ +++ ++ +  +    ++   G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + L    + ++E        Q L    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 VDTWWQTETGGILISPLPGATDLKPGSATRPFFGVKPELVDNEGKVLEGAADGNLCLIDSWPGQARTIYGDHNRFVQTYFSTYK--GKYFTGDGCRRDEDGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHHLVSEAAVVGYPHGIKGQGIYCYVTLMAGHEGNEELR------QTLIKHVRSEIGPIASPDKVQFAPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.373e-13
Identity = 58/181 (32.04%), Postives = 87/181 (48.07%), Query Frame = -2
Query:  380 TITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAA--GVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVL-SLQELC 913
            T  G +F E YG TE        L G   AG VG P+P   VK+ + E  +  A  G GE+CVK  ++FK Y K P  T ++   DG+  TGD GK   +G   I+ R         G  ++  +IE++ L   AVA+  V G   +     + A++V + E+     + + +  S +ELC
Sbjct:  449 TALGCQFYEGYGQTECTAGCCLSLPGDWTAGHVGAPMPCNYVKLVDVEEMNYLASKGEGEVCVKGANVFKGYLKDPARTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYLRSEAVAQVFVHG---ESLQAFLIAVVVPDVESLPSWAQKRGLQGSFEELC 626          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_XYLFT (Acetyl-coenzyme A synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=acsA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.373e-13
Identity = 56/214 (26.17%), Postives = 98/214 (45.79%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+V  P  G++  + +    + D    G + +    P   +  +   +   D++  T    + TGD  ++D DGYY I GR   D++ + G+++   EIES L+ HP VAE  V+G P    G  + A + L       +         QEL TW + ++    +P  +    +LP+   GK+ ++ L+
Sbjct:  409 VDTWWQTETGGILITPLIGATDLKPGSVTLPFFGIRPALVDTNGQTLDGPAAGNLVLLDSWPGQMRTLYGDHQRFIDTYFRTYPNTYFTGDGCRRDADGYYWITGRVD-DVINISGHRIGTAEIESTLVAHPKVAEAAVVGFPHPIKGQGIYAYVTLITGETPSEALH------QELLTWVRKEIGAIAIPDHVQWASNLPKTRSGKIMRRILR 615          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_MARMS (Acetyl-coenzyme A synthetase OS=Marinomonas sp. (strain MWYL1) GN=acsA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.373e-13
Identity = 66/233 (28.33%), Postives = 106/233 (45.49%), Query Frame = -2
Query:  251 WETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAE------DESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDS--LPRNAMGKVNKKELKNQLAAQQ 919
            W+T TG       GM    M     ++G  K G+   PL GVQ  + +      +E G    G   I    P   +  +   +  + ++  T DG + TGD   +D DG+Y I GR   D++ V G++L   EIES L+ HP+VAE  ++G P    G  +   +        D+E +K       L  + + ++ P   P  L  W S  LP+   GK+ ++ L+ ++AA +
Sbjct:  414 WQTETG-------GM----MMTPRIVQGDVKPGSCTGPLYGVQPALVDAQGVLQEEQGVLVEGGLVITDSWPGQARTVYGDHERFEQTYFSTFDGMYFTGDGASRDADGHYWITGRMD-DVLNVSGHRLGTAEIESALVAHPSVAEAAIVGFPHDIKGQGIYVYVSAIAGVIPDEELTK------SLKLFVRQEIGPIATPD-LIQWTSKGLPKTRSGKIMRRILR-KIAANE 626          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13
Identity = 52/183 (28.42%), Postives = 87/183 (47.54%), Query Frame = -2
Query:  362 GHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDK 904
            G +F E YG TE        + G   AG VG P+P   +K+ + E  +   A G GE+CVK P++F+ Y K P  T ++   DG+  TGD GK   +G   I+ R         G  ++  +IE++ +    VA+  V       +G+++ A ++           +  V  ++ LC+WA+ +
Sbjct:  451 GCQFYEGYGQTECTAGCCLTMPGDWTAGHVGAPMPCNLIKLVDVEEMNYMAAEGEGEVCVKGPNVFQGYLKDPAKTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYMRSEPVAQVFV-------HGESLQAFLI-----------AIVVPDVETLCSWAQKR 615          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACSA_GEMAT1.677e-1325.35Acetyl-coenzyme A synthetase OS=Gemmatimonas auran... [more]
4CLL9_ARATH1.677e-1325.674-coumarate--CoA ligase-like 9 OS=Arabidopsis thal... [more]
ACSA_MOUSE3.736e-1329.39Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus m... [more]
ACSA_AGRRH3.736e-1324.54Acetyl-coenzyme A synthetase OS=Agrobacterium rhiz... [more]
ACSL1_RAT4.879e-1335.71Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
ACSA_AGRVS4.879e-1325.00Acetyl-coenzyme A synthetase OS=Agrobacterium viti... [more]
ACSL1_MOUSE6.373e-1332.04Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSA_XYLFT6.373e-1326.17Acetyl-coenzyme A synthetase OS=Xylella fastidiosa... [more]
ACSA_MARMS6.373e-1328.33Acetyl-coenzyme A synthetase OS=Marinomonas sp. (s... [more]
ACSL1_HUMAN8.323e-1328.42Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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