CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13 Identity = 56/178 (31.46%), Postives = 86/178 (48.31%), Query Frame = -2 Query: 380 GHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVL-SLQELC 904 G +F E YG TE S + G AG VG P+P +K+ + E + A G GE+CVK P++FK Y K P T ++ DG+ TGD GK +G I+ R G ++ +IE++ + VA+ V G + + AI+V + E+ + + S +ELC Sbjct: 451 GCQFYEGYGQTECTAGCSLSVPGDWTAGHVGAPMPCNFIKLVDVEEMNYMAAMGEGEVCVKGPNVFKGYLKDPAKTAEALDKDGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVAQVFVHG---ESLQAFLIAIVVPDAESLASWARKRGFEGSFEELC 625
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 8.323e-13 Identity = 48/158 (30.38%), Postives = 78/158 (49.37%), Query Frame = -2 Query: 446 FLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICVKSPSLFKEYWKLPKVTKDSFTA----DGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIV 895 F++ YGMTE + + K +VG P + KI ESGS GE+ + P++ KE+ + D A DG+ +TGD D DGY I+GR D +K G++++ ++E+VL+ HP + + V D++ G+ A +V Sbjct: 346 FIQGYGMTESTAVGTRGFNTCKHKKYASVGLLAPNMHAKIVHLESGSCLPPGSYGELWLHGPAIMKEFCFVTGYLNDDDDAFTRKDGWLRTGDIAYFDSDGYLFIVGRLK-DTIKYKGFQIAPADLEAVLIRHPEIIDVAVTSDEDEEAGEIPVAFVV 502
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: PKSJ_BACSU (Polyketide synthase pksJ OS=Bacillus subtilis GN=pksJ PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12 Identity = 51/191 (26.70%), Postives = 87/191 (45.55%), Query Frame = -2 Query: 269 TVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 820 T+G P+ Q+ I + + AGV GE+C+ + K Y+K ++T F + F ++TGD + G +GR + K+ G+++ +IES L EHP + EC V+ D A + + L+ +EL + K+ L Y +P+ D +P GK+++ LKN Sbjct: 1465 TIGRPIANTQIYITDSQLAPVPAGVPGELCIAGDGVAKGYYKKEELTDSRFIDNPFEPGSKLYRTGDMARWLTGGRIEYIGRIDNQV-KIRGFRIELGDIESRLSEHPGILECVVVADMD-------------NLAAYYTAKHANASLTARELRHFVKNALPAYMVPSYFIQLDHMPLTPNGKIDRNSLKN 1641
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_RHILO (Acetyl-coenzyme A synthetase OS=Rhizobium loti GN=acsA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12 Identity = 58/216 (26.85%), Postives = 98/216 (45.37%), Query Frame = -2 Query: 272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKSP---SLFKEYWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVL--EEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892 ++ + TE + PL GA KAG+ P GV+ ++ + E + A G +C+ + Y + + F T G + TGD ++D DGYY I GR D++ V G+++ E+ES L+ H V+E V+G P G + + + L EE D K EL + ++ P ++ LP+ GK+ ++ L+ Sbjct: 411 VDTWWQTETGGILITPLPGATDLKAGSATRPFFGVKPQLVDGEGKVLEGAADGNLCITDSWPGQMRTVYGDHDRFVQTYFSTYKGKYFTGDGCRRDADGYYWITGRVD-DVINVSGHRMGTAEVESALVSHDKVSEAAVVGYPHDIKGQGIYSYVTLMKGEEPTEDLRK--------ELIAHVRKEIGAIASPDKIQFAPGLPKTRSGKIMRRILR 617
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAW (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MW2) GN=menE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2 Query: 275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 +GMTE F+ A L + TVG P V VKI + G GE+ +K ++ Y +T +G+F TGD + D +GY +I R D++ GG + +IE+V + P +++ +G PD +G V E + +S +L + LA YK+P D+LP + GK+ + +L Sbjct: 303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAU (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus GN=menE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2 Query: 275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 +GMTE F+ A L + TVG P V VKI + G GE+ +K ++ Y +T +G+F TGD + D +GY +I R D++ GG + +IE+V + P +++ +G PD +G V E + +S +L + LA YK+P D+LP + GK+ + +L Sbjct: 303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNVYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAT (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=menE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2 Query: 275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 +GMTE F+ A L + TVG P V VKI + G GE+ +K ++ Y +T +G+F TGD + D +GY +I R D++ GG + +IE+V + P +++ +G PD +G V E + +S +L + LA YK+P D+LP + GK+ + +L Sbjct: 303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNVYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAS (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MSSA476) GN=menE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2 Query: 275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 +GMTE F+ A L + TVG P V VKI + G GE+ +K ++ Y +T +G+F TGD + D +GY +I R D++ GG + +IE+V + P +++ +G PD +G V E + +S +L + LA YK+P D+LP + GK+ + +L Sbjct: 303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAE (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Newman) GN=menE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2 Query: 275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 +GMTE F+ A L + TVG P V VKI + G GE+ +K ++ Y +T +G+F TGD + D +GY +I R D++ GG + +IE+V + P +++ +G PD +G V E + +S +L + LA YK+P D+LP + GK+ + +L Sbjct: 303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNVYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAC (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain COL) GN=menE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2 Query: 275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 +GMTE F+ A L + TVG P V VKI + G GE+ +K ++ Y +T +G+F TGD + D +GY +I R D++ GG + +IE+V + P +++ +G PD +G V E + +S +L + LA YK+P D+LP + GK+ + +L Sbjct: 303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNVYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |