CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAA8 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain NCTC 8325) GN=menE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNVYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAA3 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain USA300) GN=menE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNVYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_HALHL (Acetyl-coenzyme A synthetase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 59/215 (27.44%), Postives = 102/215 (47.44%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKS--PSLFKEYWKLPKVTKDSFTA--DGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVL-EEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+ ++ +D+    + A  G + +    PS+ +  +   +   +++ A   G + TGD  ++DEDGYY I GR   D++ V G+++   E+ES L+ H  V+E  V+G P    G  + A + L   E   D+ K       QEL      ++ P   P  +     LP+   GK+ ++ L+
Sbjct:  407 VDTWWQTETGSILIAPLPGAMDLKPGSATLPFFGVEPQLVDDKGNVLEGATNGNLVINRAWPSMMRTIYGDHERFFNTYLAAYPGKYFTGDGARRDEDGYYWITGRVD-DVINVSGHRMGTAEVESALVLHDKVSEAAVVGYPHDVKGQGIYAYVTLMAGEEPSDELK-------QELVKLCIQEIGPIAKPDIIQFAPGLPKTRSGKIMRRILR 613          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL5_ORYSJ (4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica GN=4CLL5 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 52/211 (24.64%), Postives = 104/211 (49.29%), Query Frame = -2
Query:  266 LERYGMTEFVMAISNPL--RGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 892
            ++ YG+TE   A++  +    ++  G+VG     +Q KI +  +G     VG+                + T  +  ++G+ KTGD    +EDG+  I+ R   +++K  GY++   E+E +L  HP +A+  V+  PD++ G+   A IV +  +          ++ +++  +   ++APYK   R+    ++P++  GK+ ++EL  Q
Sbjct:  352 VQGYGLTESSGAVAATVGPEESKAYGSVGKLGSHLQAKIVDPSTGY----VGD---------------DEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLK-ELIKYKGYQVPPAELEHILQSHPGIADAAVIPYPDEEAGELPMAFIVRQPGSN---------ITKEQVMDYVAKQVAPYKKVRRVAFVTAIPKSPAGKILRRELVQQ 533          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAN (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain N315) GN=menE PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAM (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=menE PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAB (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=menE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPQMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDYEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSQHLAKYKIPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAA9 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain JH9) GN=menE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAA2 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain JH1) GN=menE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAA1 (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=menE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 57/207 (27.54%), Postives = 92/207 (44.44%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P +++   +G PD  +G       V E +           +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKEGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----------ISKAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
MENE_STAA81.420e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA31.420e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
ACSA_HALHL1.420e-1227.44Acetyl-coenzyme A synthetase OS=Halorhodospira hal... [more]
4CLL5_ORYSJ1.420e-1224.644-coumarate--CoA ligase-like 5 OS=Oryza sativa sub... [more]
MENE_STAAN1.854e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAM1.854e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAAB1.854e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA91.854e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA21.854e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
MENE_STAA11.854e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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