CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_DICDI (Acetyl-coenzyme A synthetase OS=Dictyostelium discoideum GN=acsA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 56/223 (25.11%), Postives = 104/223 (46.64%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGS------------DAAGVGEICVKSPSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ Y  TE    +  PL G  + K G+   P  G+++++ + ++G             + +GV  I    P + +  ++       ++     G + TGD  K D DGYY I GR   D++ V G++L   E+ES L+     AE  V+G P    G  + A   L+E  + D+  S  ++ L++     ++ + P+  P  + +  SLP+   GK+ ++ L+
Sbjct:  419 VDTYWQTESGGHLITPLPGVTSTKPGSATKPFFGIELQVLDSKTGERLYINPDINGCKEISGVLAISKPWPGIARSVYRSHGRYLQTYMTQYKGHYFTGDGVKLDSDGYYWIEGRVD-DVINVSGHRLGTAELESALVGCSICAEAAVVGYPHDIKGQGILAFCTLKEGYQEDE--SNVIMMLKK---EVRNVIGPFATPDVIVITPSLPKTRSGKIMRRILR 635          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_AGRRK (Acetyl-coenzyme A synthetase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12
Identity = 62/223 (27.80%), Postives = 98/223 (43.95%), Query Frame = -2
Query:  272 WETITGHRFLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKSP---SLFKEYWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919
            W+T TG   +              PL GA   K G+   P  GVQ ++ + E    + A  G + +       +   Y    +  +  F T  G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + L       QE S  +   QEL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  414 WQTETGGHMI-------------TPLPGATDLKPGSATLPFFGVQPELVDSEGKVLEGAADGNLVIADSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHKHVSEAAVVGYPHSIKGQGIYCYVTL----MVGQEGSDAL--RQELVKHVRAEIGPIASPDKIQFTPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_XYLFA (Acetyl-coenzyme A synthetase OS=Xylella fastidiosa GN=acsA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.422e-12
Identity = 57/214 (26.64%), Postives = 96/214 (44.86%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDES---GSDAAGVGEICVKSPSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+V  P  G++  + +         AAG   +    P   +  +   +   D++  T    + TGD  ++D DGYY I GR   D++ + G+++   EIES L+ HP VAE  V+G P    G  + A + L       +         QEL TW + ++     P  +    +LP+   GK+ ++ L+
Sbjct:  409 VDTWWQTETGGILITPLIGATDLKPGSVTLPFFGIRPALVDTNGQILDGPAAGNLVLLDSWPGQMRTVYGDHQRFIDTYFRTYPNTYFTGDGCRRDADGYYWITGRVD-DVINISGHRIGTAEIESTLVAHPKVAEAAVVGFPHPIKGQGIYAYVTLITGETPSEALH------QELLTWVRKEIGAIATPDHVQWAPNLPKTRSGKIMRRILR 615          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BEII9 (Acetyl-coenzyme A synthetase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=acsA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.422e-12
Identity = 59/217 (27.19%), Postives = 98/217 (45.16%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGSDAAGV--GEICVKSP------SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+ ++  D +G+   GV  G + +         ++F ++ +   V     T  G + TGD  ++D DGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  + A + L    +             EL TW +  + P   P  +     LP+   GK+ ++ L+
Sbjct:  408 VDTWWQTETGGILITPLPGATPEKPGSATLPFFGVKPQVV-DATGAVLEGVCEGNLVIADSWPGQMRTIFGDHDRF--VQSYFSTYPGKYFTGDGCRRDADGYYWITGRVD-DVINVSGHRLGTAEVESSLVAHELVSEAAVVGYPHDIKGQGIYAYVTLMNGIEPSDRLR------TELVTWVRKDIGPIATPDVVHFATGLPKTRSGKIMRRILR 614          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: DHBF_BACSU (Dimodular nonribosomal peptide synthase OS=Bacillus subtilis GN=dhbF PE=1 SV=4)

HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12
Identity = 54/221 (24.43%), Postives = 97/221 (43.89%), Query Frame = -2
Query:  275 RFLERYGMTEFVMAIS-----NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF-------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 898
            + +  YG+TE  + +S       +   R    +G  +P + V + ++       GV GE+ V    L + Y   P +T + F AD F       ++TGD  +   DG    +GR    + K+ G+++   EIE+ L++HP + +  V+   D+     ++A ++  EE               EL  +A ++L  Y +P        LP    GK+++K L
Sbjct: 1814 QLINMYGITETTVHVSYIELDRSMAALRANSLIGCGIPDLGVYVLDERLQPVPPGVAGELYVSGAGLARGYLGRPGLTSERFIADPFGPPGTRMYRTGDVARLRADGSLDYVGRADHQV-KIRGFRIELGEIEAALVQHPQLEDAAVIVREDQPGDKRLAAYVIPSEE----------TFDTAELRRYAAERLPDYMVPAAFVTMKELPLTPNGKLDRKAL 2023          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_RHIEC (Acetyl-coenzyme A synthetase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=acsA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12
Identity = 58/214 (27.10%), Postives = 99/214 (46.26%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKSP---SLFKEYWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+ ++ ++E    + A  G +C+       +   Y    +  +  F T  G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + L        E +  +   QEL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 IDTWWQTETGGHMITPLPGAIDLKPGSATVPFFGVKPELVDNEGKVLEGAADGNLCIADSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHNLVSEAAVVGYPHAIKGQGIYCYVTL----MAGHEGTDTL--RQELVKHVRAEIGPIASPDKIQFAPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_RHIE6 (Acetyl-coenzyme A synthetase OS=Rhizobium etli (strain CIAT 652) GN=acsA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12
Identity = 58/214 (27.10%), Postives = 99/214 (46.26%), Query Frame = -2
Query:  272 LERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKSP---SLFKEYWKLPKVTKDSF-TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ +  TE    +  PL GA   K G+   P  GV+ ++ ++E    + A  G +C+       +   Y    +  +  F T  G + TGD  ++DEDGYY I GR   D++ V G++L   E+ES L+ H  V+E  V+G P    G  +   + L        E +  +   QEL    + ++ P   P ++     LP+   GK+ ++ L+
Sbjct:  410 IDTWWQTETGGHMITPLPGAIDLKPGSATVPFFGVKPQLVDNEGKVLEGAADGNLCITDSWPGQMRTVYGDHERFIQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVD-DVLNVSGHRLGTAEVESALVSHNLVSEAAVVGYPHAIKGQGIYCYVTL----MAGHEGTDTL--RQELVKHVRAEIGPIASPDKIQFAPGLPKTRSGKIMRRILR 616          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: PRPE_ECOLI (Propionate--CoA ligase OS=Escherichia coli (strain K12) GN=prpE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.131e-12
Identity = 62/230 (26.96%), Postives = 103/230 (44.78%), Query Frame = -2
Query:  272 LERYGMTEF---VMAISNPLRGA-RKAGTVGNPLPGVQVKIAEDESGSDAAGVGE---ICVKSP--------------SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWA--KDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892
            ++ Y  TE    +MAI+  L     + G+ G P+ G  V++  + +G +  GV E   + V+ P                 K YW L         +   + T D G +D DGY+ ILGRT  D++ V G++L   EIE  +  HP VAE  V+G+ D   G    A ++ +E    D  + + V   QE    A    ++  +  P  ++    LP+   GK+ ++ ++
Sbjct:  383 IDNYWQTESGWPIMAIARGLDDRPTRLGSPGVPMYGYNVQLLNEVTG-EPCGVNEKGMLVVEGPLPPGCIQTIWGDDGRFVKTYWSL--------FSRPVYATFDWGIRDADGYHFILGRTD-DVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQVAVAFVIPKES---DSLEDRDVAHSQEKAIMALVDSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQ 599          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_STAAR (2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain MRSA252) GN=menE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.131e-12
Identity = 57/207 (27.54%), Postives = 90/207 (43.48%), Query Frame = -2
Query:  275 YGMTE----FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883
            +GMTE    F+ A    L    +  TVG P   V VKI       +  G GE+ +K  ++   Y     +T      +G+F TGD  + D +GY +I  R   D++  GG  +   +IE+V  + P + +   +G PD  +G       V E             +S  +L  +    LA YK+P      D+LP  + GK+ + +L
Sbjct:  303 FGMTETCSQFLTATPEMLHA--RPDTVGMPSANVDVKI----KNPNKKGHGELMIKGANVMNGYLYPTDLT--GTFENGYFNTGDIAEIDHEGYVMIYDRRK-DLIISGGENIYPYQIETVAKQFPGIIDAVCVGHPDDTWGQVPKLYFVSESN-----------ISKAQLIAYLSQHLAKYKVPKHFEKVDTLPYTSTGKLQRNKL 489          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSS3_BOVIN (Acyl-CoA synthetase short-chain family member 3, mitochondrial OS=Bos taurus GN=ACSS3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.131e-12
Identity = 52/189 (27.51%), Postives = 84/189 (44.44%), Query Frame = -2
Query:  275 GTVGNPLPGVQVKIAEDESGS-DAAGVGEICVK---SPSLFKEYWKLPKVTKDSFTAD--GFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 823
            G  G  +PG  V I +D      A  +G I VK    P  F   WK  +  K  +     G++ T D G  DE+GY  ++ R   D++ V G+++SA  +E  +L    VA+C V+G  D   G    A+ VL+++    +E       L+E+    +  + P     +      LP+   GK+ +  L
Sbjct:  472 GQAGKSVPGYNVMILDDNMQKLKARCLGNIVVKLPLPPGAFSGLWKNQEAFKHLYFEKFPGYYDTMDAGYMDEEGYVYVMSRVD-DVINVAGHRISAGALEESILSLGIVADCAVVGKEDSLKGHIPLALCVLKKDINTTEEH-----VLEEIVKHVRQTIGPVAAFRKAVFVKQLPKTRSGKIPRSTL 654          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACSA_DICDI1.854e-1225.11Acetyl-coenzyme A synthetase OS=Dictyostelium disc... [more]
ACSA_AGRRK1.854e-1227.80Acetyl-coenzyme A synthetase OS=Agrobacterium radi... [more]
ACSA_XYLFA2.422e-1226.64Acetyl-coenzyme A synthetase OS=Xylella fastidiosa... [more]
ACSA_BEII92.422e-1227.19Acetyl-coenzyme A synthetase OS=Beijerinckia indic... [more]
DHBF_BACSU3.163e-1224.43Dimodular nonribosomal peptide synthase OS=Bacillu... [more]
ACSA_RHIEC3.163e-1227.10Acetyl-coenzyme A synthetase OS=Rhizobium etli (st... [more]
ACSA_RHIE63.163e-1227.10Acetyl-coenzyme A synthetase OS=Rhizobium etli (st... [more]
PRPE_ECOLI4.131e-1226.96Propionate--CoA ligase OS=Escherichia coli (strain... [more]
MENE_STAAR4.131e-1227.542-succinylbenzoate--CoA ligase OS=Staphylococcus a... [more]
ACSS3_BOVIN4.131e-1227.51Acyl-CoA synthetase short-chain family member 3, m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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