CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO5E (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=caiC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 6.564e-26 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYDAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFIDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO57 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O157:H7 GN=caiC PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 6.564e-26 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYDAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFIDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ESCF3 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=caiC PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 8.573e-26 Identity = 71/216 (32.87%), Postives = 119/216 (55.09%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ P+ T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E +LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPQATARVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GEILSEEEFFNFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKALK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOUT (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain UTI89 / UPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 8.573e-26 Identity = 72/216 (33.33%), Postives = 118/216 (54.63%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOK1 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O1:K1 / APEC GN=caiC PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 8.573e-26 Identity = 72/216 (33.33%), Postives = 118/216 (54.63%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO7I (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 8.573e-26 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFADR-RCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_PROMH (Probable crotonobetaine/carnitine-CoA ligase OS=Proteus mirabilis (strain HI4320) GN=caiC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.120e-25 Identity = 71/214 (33.18%), Postives = 116/214 (54.21%), Query Frame = -2 Query: 272 RFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSP---SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 898 R L YGMTE ++ + G R+ ++G P Q +I + ++ GV GEICVK +LFKEY+ P T+ + DG+ TGD G QD++G++ + R S +++K GG +S +EIE+++ HP + + V+G+PD +A+ A +VL + LS + + + +A +K+P+ + LPRN GKV KK L+ Sbjct: 315 RLLTSYGMTETIVGLIGDRPGDKRRWPSIGRPGFCYQAQIRDKQNQQVPNGVVGEICVKGEPGKTLFKEYYNRPDATEKALEPDGWLHTGDYGYQDDEGFFYFVDR-SCNMIKRGGENVSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVD---------GETLSEEAFFAFCEQNMAKFKVPSAVEFKQGLPRNCSGKVIKKHLQ 518
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SHISS (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella sonnei (strain Ss046) GN=caiC PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.462e-25 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOSE (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain SE11) GN=caiC PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.462e-25 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOHS (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O9:H4 (strain HS) GN=caiC PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.462e-25 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |