CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSL6_MOUSE (Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.131e-12 Identity = 57/182 (31.32%), Postives = 87/182 (47.80%), Query Frame = -2 Query: 380 GHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKI--AEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSA----IIVLEEEAKRDQEKSKPVL-SLQELC 904 G + E YG TE + G +G VG PLP +K+ AE+ + G GEICVK P++FK Y K TK++ +DG+ TGD GK +G I+ R G ++ +IE++ + VA+ V +GD++ A I+V + E + K + + QELC Sbjct: 451 GCQVYEGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIKLVDAEELNYWTCKGEGEICVKGPNVFKGYLKDEDRTKEALDSDGWLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYV-------HGDSLKAFLVGIVVPDPEVMPSWAQKKGIEGTYQELC 625
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: PPSD_BACSU (Plipastatin synthase subunit D OS=Bacillus subtilis GN=ppsD PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12 Identity = 62/212 (29.25%), Postives = 99/212 (46.70%), Query Frame = -2 Query: 275 YGMTEFVMAISNPLRGARKAG--TVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 YG TE +A + +R K ++G P+ G QV I GV GE+C+ L + Y LP++T+ +FT + F ++TGD + DG LGR D +K+ GY++ EIESV+ V + V+ +SA +V +KP LS + + ++KL + P + DSLP + GK+++ L Sbjct: 2821 YGPTENSVA-TTVMRHMEKQAYVSIGQPIDGTQVLILNSNHQLQPIGVAGELCIAGTGLARGYVNLPELTERAFTQNPFKPEARMYRTGDAARWMADGTLEYLGRID-DQVKIRGYRVETKEIESVIRCIKGVKDAAVVAHVTASGQTELSAYVV-----------TKPGLSTNAVRSELQNKLPVFMHPAFIEKLDSLPLSPNGKLDRGAL 3019 HSP 2 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 49/188 (26.06%), Postives = 86/188 (45.74%), Query Frame = -2 Query: 275 VGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 817 +G P+ + I + GV GE+ + S+ + Y K+T D F++D F ++TGD ++ EDG +GR + K+ GY++ EIE L+ HP ++E +L D++ + A S L+ +L ++ +L Y +P + DS+P GKV++ L Sbjct: 777 IGKPIGCTDLYILNHQKQLQPCGVPGELYISGASVARGYVNHDKLTSDKFSSDPFKPDVIMYRTGDLARRLEDGNIEYIGRADNQV-KIRGYRIEPQEIEVTLMNHPDISEAAILIWQDQNGEHELCAYYC-----------SVQKLNTIDLRSYMASELPEYMIPAKWIWVDSIPLTPNGKVDRAAL 952
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LGRA_BREPA (Linear gramicidin synthase subunit A OS=Brevibacillus parabrevis GN=lgrA PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12 Identity = 58/213 (27.23%), Postives = 100/213 (46.95%), Query Frame = -2 Query: 275 YGMTEFVMAIS--NPLRGARKAGT-VGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPSLFKEYWKLPKVTKDSFT------ADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL 883 YG TE + S + +G++++ +G PLP ++ I GV GE+C+ SL + Y P +T++ FT + ++TGD + EDG LGR + K+ GY++ EI S L++ + + V+ D++ + A ++ E+E Q L+EL + +L Y +P L P A GK+++K L Sbjct: 1509 YGPTEATIYASRYSLAKGSQESPVPIGKPLPNYRMYIINRHGQLQPIGVPGELCIAGASLARGYLNNPALTEEKFTPHPLEKGERIYRTGDLARYREDGNIEYLGRMDHQV-KIRGYRIELDEIRSKLIQEETIQDAVVVARNDQNGQAYLCAYLLSEQEWTVGQ--------LREL---LRRELPEYMIPAHFVLLKQFPLTANGKLDRKAL 1709
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSL6_RAT (Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12 Identity = 50/155 (32.26%), Postives = 77/155 (49.68%), Query Frame = -2 Query: 446 GHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKI--AEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIV 904 G + E YG TE + G +G VG PLP +K+ AE+ + + G GEICVK P++FK Y K TK++ +DG+ TGD GK +G I+ R G ++ +IE++ + VA+ V +GD++ A +V Sbjct: 451 GCQVYEGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIKLVDAEELNYWTSKGEGEICVKGPNVFKGYLKDEDRTKEALDSDGWLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYV-------HGDSLKAFLV 598
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA2_PSEPK (Acetyl-coenzyme A synthetase 2 OS=Pseudomonas putida (strain KT2440) GN=acsA2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12 Identity = 59/217 (27.19%), Postives = 103/217 (47.47%), Query Frame = -2 Query: 272 LERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICVKS--PSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSL--QELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 892 ++ + TE + PL G + K G P+ GVQ + DE G + G G + +K+ P + + + D++ G++ TGD ++D DG Y I GR D++ V G+++ E+ES L+ H +VAE V+G P G V A + D +L+L +E+ ++AK +L + +LP+ GK+ ++ L+ Sbjct: 406 VDTWWQTETGGIMLTPLPGTQSLKPGCATQPMFGVQ-PVLLDEKGKLIEGPGAGVLAIKASWPGQIRSVYGDHQRMVDTYFKPLPGYYFTGDGARRDADGDYWITGRID-DVINVSGHRIGTAEVESALVLHDSVAEAAVVGYPHDLKGQGVYAFVTTMNGVTPDDTLKAELLALVSKEIGSFAKPELIQWA--------PALPKTRSGKIMRRILR 612
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = -2 Query: 446 GHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAA--GVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIV 904 G + E YG TE + G +G VG PLP +K+ + E + A G GEICV+ P++FK Y K P TK++ +DG+ TGD GK G I+ R G ++ +IE++ + VA+ V +GD++ A +V Sbjct: 451 GCQVYEGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNHIKLVDVEELNYWACKGEGEICVRGPNVFKGYLKDPDRTKEALDSDGWLHTGDIGKWLPAGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSQPVAQIYV-------HGDSLKAFLV 598
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: FAD11_MYCTU (Putative fatty-acid--CoA ligase fadD11 OS=Mycobacterium tuberculosis GN=fadD11 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11 Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = -2 Query: 488 ERYGMTEF--VMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGL 889 E +GM+E V S+P G + GTVG LPG+Q KIAED GE V+ P + K Y K P T ++ +DG+ TGD D DGY ++ R I+ G +S IE+ +L A C ++G+ Sbjct: 327 EIWGMSELSCVATASHPRDG--RLGTVGKLLPGLQGKIAED---------GEYLVRGPLVMKGYRKEPAKTAEAIDSDGWLHTGDVFDIDSDGYLRVVDRKKELIINAAGKNMSPANIENTIL-----AACPMVGV 446
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: PRPE_SALTY (Propionate--CoA ligase OS=Salmonella typhimurium GN=prpE PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 62/245 (25.31%), Postives = 112/245 (45.71%), Query Frame = -2 Query: 272 WETIT-GHRFLERYGMTEF---VMAISNPLRGA-RKAGTVGNPLPGVQVKIAEDESGSDAAGVGE---ICVKSP--------------SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIV-------LEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919 W T T G ++ Y TE +MA++ L + G+ G P+ G V++ + +G + G+ E + ++ P K YW L F + T D G +D +GYY ILGRT D++ + G++L EIE + +P VAE V+G+ D G A ++ + EA RD+E + +++L + +++ + P ++ LP+ GK+ ++ ++ Sbjct: 373 WVTETLGVPVIDNYWQTESGWPIMALARALDDRPSRLGSPGVPMYGYNVQLLNEVTG-EPCGINEKGMLVIEGPLPPGCIQTIWGDDARFVKTYWSL-------FNRQ-VYATFDWGIRDAEGYYFILGRTD-DVINIAGHRLGTREIEESISSYPNVAEVAVVGIKDALKGQVAVAFVIPKQSDTLADREAARDEENA--IMALVD------NQIGHFGRPAHVWFVSQLPKTRSGKMLRRTIQ 599
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: BGM_DROME (Very long-chain-fatty-acid--CoA ligase bubblegum OS=Drosophila melanogaster GN=bgm PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 57/231 (24.68%), Postives = 106/231 (45.89%), Query Frame = -2 Query: 230 RFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVL-LEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLF-------LWDSLPRNAMGKVNKKELKNQLAAQQ*FNLVVH 898 + ++ +GM+E + L + T+G LPG + K DA G GE+C++ +F Y + T++S D + +GD G D+ GY + GR+ I+ GG + + IE+ + E A++ ++G K ++ +I L+ E +D + LS E W K +K + + +W S+ +A+ + NK+ + N Q+ F ++ H Sbjct: 414 KIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFIN----KDANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRK----YLTVLITLKTEVDKDSGEPLDELS-HESSVWVKSLGVEHKTVSDILAAGPCPKVWKSI-EDAIKRANKQSISNAQKVQK-FTILPH 633
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: SRFAC_BACSU (Surfactin synthetase subunit 3 OS=Bacillus subtilis GN=srfAC PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11 Identity = 61/230 (26.52%), Postives = 104/230 (45.22%), Query Frame = -2 Query: 254 RFLERYGMTE---FVMA-ISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKSPSLFKEYWKLPKVTKDSFTADGF------FKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL----KNQLAAQ 898 + + YG TE F A + + L + + +G P+ V I ++S G VGE+C+ + K Y +TK+ F + F ++TGD + DG GR D +K+ G+++ EIE L E+P V + V+ + +++A +V ++ LS +++ K +L Y +P D LP GKVNK+ L ++QLA + Sbjct: 748 KLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRID-DQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHESGDASINAYLV-----------NRTQLSAEDVKAHLKKQLPAYMVPQTFTFLDELPLTTNGKVNKRLLPKPDQDQLAEE 965 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |