CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO24 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=caiC PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.462e-25 Identity = 72/216 (33.33%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SHIFL (Probable crotonobetaine/carnitine-CoA ligase OS=Shigella flexneri GN=caiC PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.910e-25 Identity = 71/216 (32.87%), Postives = 118/216 (54.63%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAI-SNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I + R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPSDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLU (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.910e-25 Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = -2 Query: 272 RFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 898 R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 314 RLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLC (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiC PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.910e-25 Identity = 71/216 (32.87%), Postives = 118/216 (54.63%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ P+ T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOL6 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O6 GN=caiC PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.910e-25 Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = -2 Query: 272 RFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 898 R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 314 RLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOL5 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.910e-25 Identity = 71/214 (33.18%), Postives = 117/214 (54.67%), Query Frame = -2 Query: 272 RFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 898 R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 314 RLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSM1_MOUSE (Acyl-coenzyme A synthetase ACSM1, mitochondrial OS=Mus musculus GN=Acsm1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.494e-25 Identity = 79/228 (34.65%), Postives = 117/228 (51.32%), Query Frame = -2 Query: 266 QQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGS----DAAGVGEICVKSP---SLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEE-AKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 925 +QW+ TG E YG +E ++ + K G++G + ++I DE G+ + G I +K LF EY P+ T + D F+ +GD DE+GY LGR D++ GY++ +E+E+ L EHPAVAE V+ PDKD G+ V A IVL E DQE+ ++EL K APYK P ++ LP+ GK+ +KEL+N+ Sbjct: 349 EQWKQRTGLSIHEVYGQSETGISSATLREMKIKRGSIGKAILPFDLQII-DEKGNILPPNTEGYIGIRIKPTRPLGLFMEYENSPESTSEVECGD-FYNSGDRATIDEEGYIWFLGRGD-DVINASGYRIGPVEVENALAEHPAVAESAVVSSPDKDRGEVVKAFIVLNPEFLSHDQEQ-----LIKELQHHVKSVTAPYKYPRKVEFVSELPKTVTGKIKRKELRNK 568
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO8A (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O8 (strain IAI1) GN=caiC PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 3.258e-25 Identity = 71/216 (32.87%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +V+ E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVVNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO45 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=caiC PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 4.255e-25 Identity = 71/216 (32.87%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVSLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFCFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSM1_HUMAN (Acyl-coenzyme A synthetase ACSM1, mitochondrial OS=Homo sapiens GN=ACSM1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.255e-25 Identity = 78/231 (33.77%), Postives = 113/231 (48.92%), Query Frame = -2 Query: 254 QQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESG------SDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEE-AKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 925 ++W+ TG E YG +E + + K G +G P V++ +D+ G+ V+ SLF Y P+ T D F+ TGD GK DE+GY LGR S DI+ GY++ E+ES L+EHPAVAE V+G PD G+ V A IVL + D+++ +EL K APYK P ++ LP+ GK+ +KEL+ + Q Sbjct: 353 EEWKRRTGLLLYENYGQSETGLICATYWGMKIKPGFMGKATPPYDVQVIDDKGSILPPNTEGNIGIRIKPVRPVSLFMCYEGDPEKTAKVECGD-FYNTGDRGKMDEEGYICFLGR-SDDIINASGYRIGPAEVESALVEHPAVAESAVVGSPDPIRGEVVKAFIVLTPQFLSHDKDQ-----LTKELQQHVKSVTAPYKYPRKVEFVSELPKTITGKIERKELRKKETGQ 576 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |