CV884877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO55 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain 55989 / EAEC) GN=caiC PE=3 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25 Identity = 71/216 (32.87%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAI-SNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I + R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPSDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSM4_MOUSE (Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Mus musculus GN=Acsm4 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.557e-25 Identity = 75/227 (33.04%), Postives = 112/227 (49.34%), Query Frame = -2 Query: 266 MQQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPS-----LFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 928 ++QW+ TG E YG TE + +N A K G++G + V+I ++ +G GEI ++ S F EY P+ T D+ F+ TGD G D+DGY+ +GR D++ GY++ E+ES L+EHPAV E V+ PD G+ V A IVL K + EL K+ APYK P ++ LP+ GK+ + L++Q Sbjct: 355 LEQWKMQTGLELYEGYGQTEVGIICANRKGEAIKPGSMGKGVVPYDVQIIDENGNILPSGKEGEIALRLKSDRPFCFFSEYVDNPEKT-DATIRRNFYVTGDRGVMDDDGYFWFVGRAD-DVIISSGYRIGPFEVESALIEHPAVVESAVVSSPDPIRGEVVKAFIVLAAPYKCSNREKLTA----ELQDHVKNSTAPYKYPRKVEFVQELPKTITGKIKRNVLRDQ 575
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECO27 (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=caiC PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.258e-25 Identity = 71/216 (32.87%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ PK T ADG+ TGDTG +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+ + L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGQAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDR-RCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFCFCEQNMAKFKVLSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_SALAR (Probable crotonobetaine/carnitine-CoA ligase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiC PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.479e-25 Identity = 69/227 (30.40%), Postives = 125/227 (55.07%), Query Frame = -2 Query: 272 MQQWETIT---GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 928 +Q+ E T G R YGMTE ++ I G R+ ++G P + +I +++ + G +GEIC+K +LFK Y++ P T + +G+ TGD+G +DE+G++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E L+ ++ T+ ++ +A +K+P+ L + + LPRN GK+ KK LK Sbjct: 301 VQEKEAFTERFGVRLFTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRNEQNRALPPGEIGEICIKGIPGKTLFKSYFERPDATAKALEPNGWLHTGDSGYRDEEGFFYFVDRR-CNMVKRGGENVSCVELENIIAGHPKIQDVVVIGIKDDIRDEAIKAFVVLNE---------GETLTEEDFFTFCEENMAKFKVPSYLEIREDLPRNCSGKIIKKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_PROSL (Probable crotonobetaine/carnitine-CoA ligase OS=Proteus sp. (strain LE138) GN=caiC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.238e-24 Identity = 69/214 (32.24%), Postives = 116/214 (54.21%), Query Frame = -2 Query: 272 RFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVKSPS---LFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 898 R L +GMTE ++ + G R+ ++G P Q +I + ++ GV GEICVK + LFKEY+ P T+ + DG+ TGD G +D++G++ + R S +++K GG +S +EIE+++ HP + + V+G+PD +A+ A +VL + LS + + + +A +K+P+ + LPRN GKV KK L+ Sbjct: 315 RLLTSHGMTETIVGLIGDRPGDKRRWPSIGRPGFCYQAQIRDKQNQQVPNGVVGEICVKGEAGKTLFKEYYNRPDATEKALEPDGWLHTGDYGYRDDEGFFYFVDR-SCNMIKRGGENVSCIEIENIIASHPKIQDVAVIGVPDDIRDEAIKAFVVLVD---------GETLSEEAFFAFCEQNMAKFKVPSAVEFKQGLPRNCSGKVIKKHLQ 518
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOLI (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12) GN=caiC PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.238e-24 Identity = 70/216 (32.41%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ P+ T ADG+ TGDTG +DE+ ++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDR-RCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECODH (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12 / DH10B) GN=caiC PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.238e-24 Identity = 70/216 (32.41%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ P+ T ADG+ TGDTG +DE+ ++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDR-RCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: CAIC_ECOBW (Probable crotonobetaine/carnitine-CoA ligase OS=Escherichia coli (strain K12 / BW2952) GN=caiC PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.238e-24 Identity = 70/216 (32.41%), Postives = 117/216 (54.17%), Query Frame = -2 Query: 272 GHRFLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVKIAEDESGSDAAG-VGEICVKS---PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 904 G R L YGMTE ++ I G R+ ++G + +I +D + AG +GEIC+K ++FKEY+ P+ T ADG+ TGDTG +DE+ ++ + R +++K GG +S +E+E+++ HP + + V+G+ D +A+ A +VL E LS +E + + +A +K+P+ L + LPRN GK+ +K LK Sbjct: 312 GVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDR-RCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNE---------GETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK 517
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: YDAB_BACSU (Putative acyl--CoA ligase ydaB OS=Bacillus subtilis GN=ydaB PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.758e-24 Identity = 72/209 (34.45%), Postives = 115/209 (55.02%), Query Frame = -2 Query: 266 YGMTE-FVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDA--AGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 883 YG TE + ++ P G KA + G P+ GV+VK+ + +G + +GEI V +P LFK Y P+ T +G+F+TGD+G DEDG+ I GR D++ GG + ++E V+ + P + E V+G+PD YG+ A IV + +E ++ + K++L+ YK+P F+ + LP+N +GKV K L+NQ Sbjct: 303 YGSTEAWGISTWTPDMGMDKAASAGKPVAGVKVKVEDPLTGEELPQGEIGEIVVHTPFLFKGYEDNPEATA-KVLQNGWFRTGDSGYVDEDGFIFITGRYK-DVIIYGGDNVYPDQVEEVIQQIPGILETAVVGIPDPLYGEKPKAFIVKNGGQRITEE---------DVIAFCKERLSAYKIPEVEFV-NELPKNNLGKVKKDVLRNQ 499
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSM5_MOUSE (Acyl-coenzyme A synthetase ACSM5, mitochondrial OS=Mus musculus GN=Acsm5 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.758e-24 Identity = 78/226 (34.51%), Postives = 110/226 (48.67%), Query Frame = -2 Query: 266 QWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICVK-SPS----LFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEE-AKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 922 +W++ TG E YG +E V+ N K+G++G P V+I ++E G G I V+ P+ F Y P+ T S D F+ TGD DEDGY+ LGR D++ Y++ +E+ES L EHPAV E V+ PD G+ V A IVL A D P +EL K APYK P ++ LP+ GK+ + +L+NQ Sbjct: 356 KWKSQTGLELHEGYGQSETVVICGNSRNSTIKSGSMGKASPPYDVQIVDEEGNVLPPGKEGNIAVRIKPTRPFCFFNCYLDNPEKTAASEQGD-FYITGDRAHMDEDGYFWFLGRND-DVINSSSYRIGPVEVESALAEHPAVLESAVVSSPDPIRGEVVKAFIVLSPAYASHD-----PEALTRELQEHVKTVTAPYKYPRKVAFISELPKTVSGKILRSKLRNQ 574 The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bpback to top |