CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSM3_HUMAN (Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Homo sapiens GN=ACSM3 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.982e-23
Identity = 73/227 (32.16%), Postives = 109/227 (48.02%), Query Frame = -2
Query:  266 QQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV-GEICV-----KSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAK-RDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 925
            ++W   TG    E YG TE V+   N      K G++G P P   VKI +        G  G+I +     +   LF  Y   P  T  +   + F+ TGD G  D+DGY+  + R   D++   GY++   E+E+ L EHP+VAE  V+  PD   G+ V A +VL  + K  DQE+      ++E+    K   APYK P ++     LP+   GK  + EL+ +
Sbjct:  362 EKWRNKTGLDIYEGYGQTETVLICGNFKGMKIKPGSMGKPSPAFDVKIVDVNGNVLPPGQEGDIGIQVLPNRPFGLFTHYVDNPSKTASTLRGN-FYITGDRGYMDKDGYFWFVARAD-DVILSSGYRIGPFEVENALNEHPSVAESAVVSSPDPIRGEVVKAFVVLNPDYKSHDQEQ-----LIKEIQEHVKKTTAPYKYPRKVEFIQELPKTISGKTKRNELRKK 581          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_PENCH (Acetyl-coenzyme A synthetase OS=Penicillium chrysogenum GN=facA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.982e-23
Identity = 72/222 (32.43%), Postives = 115/222 (51.80%), Query Frame = -2
Query:  251 ERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGSDAAG---VGEICVKSP--SLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 889
            + Y  TE    +  PL G    K G+   P  G++  I +  SG +  G    G +  K P  S+ +  W   K   D++     G++ TGD   +D DGYY I GR   D++ V G++LS  EIE+ LLEHP+VAE  V+G+ D+  G AV+A + L +E K  ++ SK      +L    +  + P+  P  +F+ D LP+   GK+ ++ L+  L+ ++
Sbjct:  428 DTYWQTETGSHVITPLGGITPTKPGSASLPFFGIEPAIIDPVSGEEIVGNDVEGVLAFKQPWPSMARTVWGAHKRYMDTYLNVYKGYYFTGDGAGRDHDGYYWIRGRVD-DVVNVSGHRLSTAEIEAALLEHPSVAEAAVVGIADELTGQAVNAFVSL-KEGKPTEQISK------DLAMQVRKSIGPFAAPKAVFVVDDLPKTRSGKIMRRILRKILSGEE 641          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_EMENI (Acetyl-coenzyme A synthetase OS=Emericella nidulans GN=facA PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 6.793e-23
Identity = 69/222 (31.08%), Postives = 113/222 (50.90%), Query Frame = -2
Query:  251 ERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKI-----AEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSF--TADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 889
            + Y  TE    +  PL G    K G+   P  G++  I      E+ SG+D  GV       PS+ +  W   K   D++     G++ TGD   +D +GYY I GR   D++ V G++LS  EIE+ L+EHP VAE  V+G+ D+  G AV+A + L+E  + + +  K      +L    +  + P+  P  +F+ D LP+   GK+ ++ L+  L+ ++
Sbjct:  428 DTYWQTETGSNVITPLAGVTPTKPGSASLPFFGIEPAIIDPVSGEEISGNDVEGVLAFKQPWPSMARTVWGAHKRYMDTYLNVYKGYYFTGDGAGRDHEGYYWIRGRVD-DVVNVSGHRLSTAEIEAALIEHPMVAEAAVVGIADELTGQAVNAFVSLKEGNETNDQVRK------DLILQVRKSIGPFAAPKAVFVVDDLPKTRSGKIMRRILRKILSGEE 642          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: BCLA_THAAR (Benzoate--CoA ligase OS=Thauera aromatica GN=bclA PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.872e-23
Identity = 75/227 (33.04%), Postives = 119/227 (52.42%), Query Frame = -2
Query:  269 QQWETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSD--AAGV-GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEE-----EAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKN 925
            ++W+   G   L+  G TE +    +   G    GT G P+PG ++++  DE G++   AGV GE+ +  PS    YW  P+ T  +F  + + ++GD    +++GYY+  GR S D++KV G  +S +E+ES L+ H AV E  V+G  D+D+     A IVL+      EA R   K+             K+ LAPYK P  +   D LP+ A GK+ + +L++
Sbjct:  314 RRWQARFGVDILDGIGSTEMLHIFLSNRAGDVHYGTSGKPVPGYRLRLI-DEDGAEITTAGVAGELQISGPSSAVMYWNNPEKTAATFMGE-WTRSGDKYLVNDEGYYVYAGR-SDDMLKVSGIYVSPIEVESALIAHEAVLEAAVVGWEDEDHLIKPKAFIVLKPGYGAGEALRTDLKAH-----------VKNLLAPYKYPRWIEFVDDLPKTATGKIQRFKLRS 526          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_LISMF (2-succinylbenzoate--CoA ligase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=menE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.513e-22
Identity = 74/211 (35.07%), Postives = 105/211 (49.76%), Query Frame = -2
Query:  266 LERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 892
            ++ +GMTE    I    P     K G+ G  L   +VKIA+D         GEI +K PS+   Y    K T+ SF  DG+FKTGD G  DE+G+  +L R S D++  GG  +   EIE V+ E+  V E  V+G PD  +G    A IV EE                EL    +  LA YK+P ++ + + LP+ A GK+ + +LK +
Sbjct:  276 VQSFGMTETASQIVTLPPKDALNKIGSSGKALFPAEVKIADD---------GEILLKGPSITPGYLHNKKATEASFV-DGWFKTGDIGYLDEEGFLFVLERRS-DLIISGGENIYPTEIEHVISEYEGVKEVAVIGKPDDKWGSVPVAFIVAEE-----------TFDEAELRLICETNLAGYKIPKQITIVEKLPKTASGKIQRNKLKER 464          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_LACLA (2-succinylbenzoate--CoA ligase OS=Lactococcus lactis subsp. lactis GN=menE PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.976e-22
Identity = 78/206 (37.86%), Postives = 108/206 (52.43%), Query Frame = -2
Query:  272 YGMTE-FVMAIS-NPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 883
            YGMTE F  +++ N L    K  +VG PLPGV+++I +    +D AGVGEI +KSP L K Y       K   TA   F+TGD G  D DG+  +L R   DI+  GG  +   EIE ++   P + EC ++  PD  +G     + +L       QEK +  L+         +KLA YK P  +   D LP+NA GK+ +KELK
Sbjct:  270 YGMTESFSQSVTFNILDFPDKTSSVGRPLPGVEIEIRQ----ADLAGVGEIWLKSPMLMKAYLG----QKPYGTA---FETGDIGYLDTDGFLYLLNRRK-DIIISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQ----VPILFVSGNISQEKLENFLT---------EKLAKYKRPQSITFMDELPKNASGKILRKELK 450          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.976e-22
Identity = 63/215 (29.30%), Postives = 115/215 (53.49%), Query Frame = -2
Query:  266 ERYGMTEFVMAISNPLRG-----ARKAGTVGNPLPGVQVKIAEDESGSD--AAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 889
            E YG+TE          G       K  +VG  LP ++VK  + ++G    A   GE+CV+S S+ + Y+K  + T+ +    G+  TGD G  D DG   I+ R   +++K  G++++  E+E+VLL HP+V +  V G+PD++ G+   A +V    A+  +E         E+  +  +++A YK    L + D++P++  GK+ +++L+++
Sbjct:  342 EAYGLTEHSCITLTHAAGDGHGHVAKKSSVGFILPNLEVKFVDPDTGRSLPANTPGELCVRSQSVMQGYYKRKEETERTVDGKGWLHTGDVGYIDGDGDVFIVDRIK-ELIKYKGFQVAPAELEAVLLSHPSVEDAAVFGVPDEEAGEVPVACVVRRHGAEEGEE---------EIVAYVAERVASYKRVRVLHIVDAIPKSVSGKILRRQLRDE 546          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.976e-22
Identity = 62/222 (27.93%), Postives = 116/222 (52.25%), Query Frame = -2
Query:  263 ETITGHRFLERYGMTEFVMAISNPLRGAR--KAGTVGNPLPGVQVKIAEDESGS--DAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 916
            +T+     ++ YGMTE     +      +  +  +VG   P +Q K+ +  SGS       GE+ ++ P + K Y   PK T+ S   D + +TGD    DEDGY  I+ R   +I+K  G++++  ++E+VL+ HP + +  V   P+++ G+   A +V  +E           LS +++ ++   ++APY+   ++ + +S+P++  GK+ +KELK  L
Sbjct:  347 QTLPHVDLIQGYGMTESTAVGTRGFNSEKLSRYSSVGLLAPNMQAKVVDWSSGSFLPPGNRGELWIQGPGVMKGYLNNPKATQMSIVEDSWLRTGDIAYFDEDGYLFIVDRIK-EIIKYKGFQIAPADLEAVLVSHPLIIDAAVTAAPNEECGEIPVAFVVRRQET---------TLSEEDVISYVASQVAPYRKVRKVVMVNSIPKSPTGKILRKELKRIL 558          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACCQ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain Q1) GN=menE PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.371e-22
Identity = 70/208 (33.65%), Postives = 109/208 (52.40%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D     A   GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HPAVAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  281 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------VTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 475          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.403e-22
Identity = 60/217 (27.65%), Postives = 117/217 (53.92%), Query Frame = -2
Query:  254 LERYGMTEF--VMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAG--VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQ 892
            ++ YGMTE   ++++ +P  G R +G+ G   PGV+ +I   E+G        GEI V+ P++ K Y   P+ TK++     +  TGD G  +EDG   ++ R   +++K  G++++  E+E +L+ HP + +  V+  PD++ G+   A +V    +          ++ Q++  +   ++APYK   R+     +P++A GK+ ++EL  Q+ ++
Sbjct:  337 MQGYGMTETCGIVSVEDPRLGKRNSGSAGMLAPGVEAQIVSVETGKSQPPNQQGEIWVRGPNMMKGYLNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVDRIK-ELIKYKGFQVAPAELEGLLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSS---------ITEQDIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKILRRELVQQVRSK 543          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
ACSM3_HUMAN3.982e-2332.16Acyl-coenzyme A synthetase ACSM3, mitochondrial OS... [more]
ACSA_PENCH3.982e-2332.43Acetyl-coenzyme A synthetase OS=Penicillium chryso... [more]
ACSA_EMENI6.793e-2331.08Acetyl-coenzyme A synthetase OS=Emericella nidulan... [more]
BCLA_THAAR8.872e-2333.04Benzoate--CoA ligase OS=Thauera aromatica GN=bclA ... [more]
MENE_LISMF1.513e-2235.072-succinylbenzoate--CoA ligase OS=Listeria monocyt... [more]
MENE_LACLA1.976e-2237.862-succinylbenzoate--CoA ligase OS=Lactococcus lact... [more]
4CLL9_ORYSJ1.976e-2229.304-coumarate--CoA ligase-like 9 OS=Oryza sativa sub... [more]
4CLL6_ARATH1.976e-2227.934-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
MENE_BACCQ3.371e-2233.652-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
4CLL7_ARATH4.403e-2227.654-coumarate--CoA ligase-like 7 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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