CV884877

Overview
NameCV884877
Unique NameCV884877
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACCN (2-succinylbenzoate--CoA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=menE PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.751e-22
Identity = 69/211 (32.70%), Postives = 109/211 (51.66%), Query Frame = -2
Query:  263 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQL 889
            + YGMTE    I          K G+ G PL   Q++I +D     A   GEI VK P++ + Y+K    T+++   DG+  TGD G  D++G+  +L R S D++  GG  +   +IE VLL HP V E  V+G  D+ +G    A +V   +           ++ +E+  + ++KLA YK+P  ++    LPRNA  K+ ++EL+  L
Sbjct:  281 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFPCQLRIEKDGKVMPANVEGEIVVKGPNVTRGYFKREDATRETIV-DGWLHTGDLGYVDDEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPLVLEAGVVGKSDETWGQVPVAFVVKAGQ-----------VTEEEMIHFCEEKLAKYKVPKAVYFLHELPRNASKKLLRRELRQLL 478          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LCFA_HAEIN (Long-chain-fatty-acid--CoA ligase OS=Haemophilus influenzae GN=fadD PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.751e-22
Identity = 68/227 (29.96%), Postives = 117/227 (51.54%), Query Frame = -2
Query:  251 QWETITGHRFLERYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVKIAEDESGSDA--AGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 922
            +W  +TG   +E YGMTE    I+  P+   +  GT+G P+P   +KI +D+ GSDA     GE+ VK   + + YW+ P+ T +    DG+  TGD    DE     I+ R   DI+ V G+ +   EIE V++ +  V+E   +G+P    G+ +   +V ++++          L+  EL    +  L  YK+P  +   D LP+  +GK+ ++ L+++  A++
Sbjct:  346 RWHELTGCNIIEGYGMTECSPLIAACPINVVKHNGTIGVPVPNTDIKIIKDD-GSDAKIGEAGELWVKGDQVMRGYWQRPEATSEVLK-DGWMATGDIVIMDESYSLRIVDRKK-DIILVSGFNVYPNEIEDVVMLNYKVSEAVAIGVPHAVSGETIKIFVVKKDDS----------LTRDELRNHCRQYLTGYKVPKEIEFRDELPKTNVGKILRRVLRDEEIAKR 559          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACCZ (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ZK / E33L) GN=menE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.809e-22
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HP VAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P + +  + LPRNA  K+ ++EL+
Sbjct:  282 QTYGMTETSSQICTLSADYMLMKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------ITEEEILHFCEEKLAKYKVPKKAWFLEELPRNASKKLLRRELR 476          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACC7 (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain AH187) GN=menE PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.809e-22
Identity = 69/208 (33.17%), Postives = 109/208 (52.40%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   +++I +D     A   GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HPAVAE  V+G+ D  +G   +A +V   E           ++ +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  281 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCRLRIEKDGVVVPAFTEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMTDDKWGQVPAAFVVKSGE-----------VTEEEIIHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 475          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: LUCI_LUCMI (Luciferin 4-monooxygenase OS=Luciola mingrelica PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.809e-22
Identity = 68/215 (31.63%), Postives = 113/215 (52.56%), Query Frame = -2
Query:  251 YGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV---GEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYK-LPTRLFLWDSLPRNAMGKVNKKELKNQLAAQQ 883
            YG+TE   A      G  K G  G  +P  +VK+ + ++     GV   GEICVK PSL   Y   P+ T+++   +G+  TGD G  DED ++ I+ R  + ++K  GY++   E+ESVLL+HP + +  V G+PD D G+   A++V+        EK K  ++ +E+  +   ++  +K L   +   D +P+   GK++ K ++  L   Q
Sbjct:  342 YGLTETTSAFIITPEGDDKPGASGKVVPLFKVKVIDLDT-KKTLGVNRRGEICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLKS-LIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVM--------EKGK-TMTEKEIVDYVNSQVVNHKRLRGGVRFVDEVPKGLTGKIDAKVIREILKKPQ 545          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACWK (2-succinylbenzoate--CoA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=menE PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.673e-21
Identity = 70/208 (33.65%), Postives = 107/208 (51.44%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T ++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HPAV E  V+G+ D+ +G   +A +V          KS  V   +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  281 QTYGMTETSSQICTLTADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPRAEGEIVVKGPNVTGGYFNREDATHEAIR-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPAVVEAGVVGMADESWGQVPAAFVV----------KSGDVTE-EEIIRFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 475          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_PASMU (Acetyl-coenzyme A synthetase OS=Pasteurella multocida GN=acsA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.673e-21
Identity = 71/234 (30.34%), Postives = 116/234 (49.57%), Query Frame = -2
Query:  254 WETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGSDAAGV--GEICVKSP--SLFKEYWKLPKVTKDSFT----ADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKEL----KNQLAAQ 919
            W+T TG            +M    P   A K G+   PLPG+  ++  DE+G   A    G + +K P  S+ +  W  P+  K ++        ++  GD   +D+DGY+ ILGRT  D++ V G++L  +EIES L+  P VAE  V+G PD+  G+A+ A +VL +     +E  +     +EL  W  +++     P  +   D+LP+   GK+ ++ L    KN++  Q
Sbjct:  417 WQTETGS-----------IMLAPIPGVTATKPGSCTLPLPGIMAEVL-DENGQKCAVEQGGALAIKRPFPSMLRTIWNDPERYKSTYFPAEYGGKYYIAGDNAHRDKDGYFWILGRTD-DVLNVSGHRLGTMEIESALVASPKVAEAAVVGKPDEIKGEAIVAFVVLNDFRPEGEEARQ---LAEELKAWVSNEIGKIARPEDIRFADNLPKTRSGKIMRRLLRSIAKNEMITQ 634          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: ACSA_BACSU (Acetyl-coenzyme A synthetase OS=Bacillus subtilis GN=acsA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.673e-21
Identity = 64/219 (29.22%), Postives = 106/219 (48.40%), Query Frame = -2
Query:  272 WETITGHRFLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVKIAEDESGS-DAAGVGEICVKS--PSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 919
            W T TG + +  Y   +             K G++G P+PGV+  I +++        +G + +K   PS+    W  P+  +  F   G++ +GD+   DE+GY+   GR   D++   G ++   E+ES L+EHPA+AE  V+G PD   G+ + A I L  E     +K K     +E+  + K  LA +  P  +   D LP+   GK+ ++ LK
Sbjct:  357 WMTETGSQLICNYPCMDI------------KPGSMGKPIPGVEAAIVDNQGNELPPYRMGNLAIKKGWPSMMHTIWNNPEKYESYFMPGGWYVSGDSAYMDEEGYFWFQGRVD-DVIMTSGERVGPFEVESKLVEHPAIAEAGVIGKPDPVRGEIIKAFIAL-REGFEPSDKLK-----EEIRLFVKQGLAAHAAPREIEFKDKLPKTRSGKIMRRVLK 556          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: YNGI_BACSU (Putative acyl-CoA synthetase yngI OS=Bacillus subtilis GN=yngI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 69/211 (32.70%), Postives = 101/211 (47.87%), Query Frame = -2
Query:  266 YGMTEFVMAISNPLRG---ARKAGTVGNPLPGVQVKIAEDESGSDAAG--VGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELKNQ 883
            YG TE    I+         R+  T G  LP  +VKI E  +  +      GE+C +   + K Y+K    T+ +   DG+  TGD    DEDGY  I GR   D++  GG  +   EIE  L +HPAV +  V+G+PD  +G+  +A I L         K    +S  EL  + K K+A +K+P  +   D  P  A GK+ K +L+ +
Sbjct:  338 YGQTEASPVITQTRANDSFIRRVETTGRALPHTEVKIVEPGTCQEVQRGMQGELCTRGYHVMKGYYKDKDATRKAINHDGWLFTGDLAVMDEDGYCRITGRLK-DMLIRGGENIYPREIEEFLYQHPAVLDVQVVGVPDAKFGEEAAAWIKL---------KDGKSVSPDELKAYCKGKIARHKIPRYVIFTDDYPMTASGKIQKYKLREK 538          
BLAST of CV884877 vs. ExPASy Swiss-Prot
Match: MENE_BACCR (2-succinylbenzoate--CoA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=menE PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.185e-21
Identity = 71/208 (34.13%), Postives = 108/208 (51.92%), Query Frame = -2
Query:  272 ERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVKIAEDESGSDAAGVGEICVKSPSLFKEYWKLPKVTKDSFTADGFFKTGDTGKQDEDGYYIILGRTSADIMKVGGYKLSALEIESVLLEHPAVAECCVLGLPDKDYGDAVSAIIVLEEEAKRDQEKSKPVLSLQELCTWAKDKLAPYKLPTRLFLWDSLPRNAMGKVNKKELK 889
            + YGMTE    I          K G+ G PL   Q++I +D         GEI VK P++   Y+     T+++   +G+  TGD G  DE+G+  +L R S D++  GG  +   +IE VLL HPAVAE  V+G+ D  +G   +A +V          KS  V   +E+  + ++KLA YK+P +    + LPRNA  K+ ++EL+
Sbjct:  282 QTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPLVEGEIVVKGPNVTGGYFNREDATRETIQ-NGWLHTGDLGYLDEEGFLYVLDRRS-DLIISGGENIYPAQIEEVLLSHPAVAEAGVVGMSDDKWGQVPAAFVV----------KSGAVTE-EEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELR 476          
The following BLAST results are available for this feature:
BLAST of CV884877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 418
Match NameE-valueIdentityDescription
MENE_BACCN5.751e-2232.702-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
LCFA_HAEIN5.751e-2229.96Long-chain-fatty-acid--CoA ligase OS=Haemophilus i... [more]
MENE_BACCZ9.809e-2232.692-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
MENE_BACC79.809e-2233.172-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]
LUCI_LUCMI9.809e-2231.63Luciferin 4-monooxygenase OS=Luciola mingrelica PE... [more]
MENE_BACWK1.673e-2133.652-succinylbenzoate--CoA ligase OS=Bacillus weihens... [more]
ACSA_PASMU1.673e-2130.34Acetyl-coenzyme A synthetase OS=Pasteurella multoc... [more]
ACSA_BACSU1.673e-2129.22Acetyl-coenzyme A synthetase OS=Bacillus subtilis ... [more]
YNGI_BACSU2.185e-2132.70Putative acyl-CoA synthetase yngI OS=Bacillus subt... [more]
MENE_BACCR2.185e-2134.132-succinylbenzoate--CoA ligase OS=Bacillus cereus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_011B08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV884877 ID=CV884877; Name=CV884877; organism=Citrus sinensis; type=EST; length=929bp
CAAATAATTCGTAAATCTATATGAAGATATTGGTTCTACAAGCATATTTG
AAGTATTTTTCGTAAGTAAAATATAGATGGTTGACATAACTCAGCTGTAA
CTCTTTCTAGCCTTTATAATGTATACAAGACTATTACAAGCTTCTCACTT
GGGATCTTTCGACCGAAAGGAAAAGAATGAAAAATAAATGTTTCTTCTAG
TTCATTCTTGCATTCCTCACTTATAATTAATGTACAACTAAGTTGAATTA
TTGTTGTGCAGCCAGTTGGTTCTTCAACTCTTTCTTGTTCACCTTTCCCA
TGGCATTTCGAGGCAGAGAGTCCCACAAGAACAGACGGGTTGGCAGCTTG
TACGGCGCAAGCTTGTCTTTAGCCCAGGTGCAAAGTTCTTGCAAGCTTAA
TACAGGCTTTGACTTCTCTTGATCTCTCTTTGCTTCTTCTTCAAGCACAA
TTATGGCACTTACAGCATCTCCATAGTCTTTGTCTGGCAAGCCCAATACA
CAACACTCCGCTACAGCTGGATGCTCCAAAAGAACTGATTCAATTTCCAA
TGCAGATAATTTGTATCCACCAACCTTCATAATATCAGCACTCGTACGGC
CCAAAATGATGTAGTATCCATCTTCATCCTGTTTCCCTGTGTCCCCAGTC
TTGAAGAATCCATCAGCAGTAAATGAGTCCTTTGTTACCTTGGGAAGTTT
CCAGTATTCCTTAAACAAAGAAGGGCTTTTAACGCAAATCTCTCCTACTC
CTGCTGCATCACTACCACTTTCATCTTCAGCAATCTTGACCTGAACACCA
GGAAGTGGATTGCCAACAGTGCCTGCCTTTCGTGCACCCCTTAAGGGATT
TGATATTGCCATGACAAATTCTGTCATGCCATATCGTTCCAAAAAGCGAT
GCCCTGTGATAGTTTCCCATTGTTGCATG
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