CV884835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBPW_MOUSE (Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.493e-11 Identity = 59/189 (31.22%), Postives = 86/189 (45.50%), Query Frame = -2 Query: 220 SALSDIFGGQLKSVVKAH-GNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 780 S + DIFGG +S +K S T FL + +DI S +++ AL E L G G + A K++ + K+L++ L RFS + KL + V +P L L + L P+ Y L A + H G GHY + + +W DD VT + VL++ AYVLFY Q Sbjct: 164 SPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISS--AQSVKQALWDTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 347
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP51_HUMAN (Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11 Identity = 47/165 (28.48%), Postives = 76/165 (46.06%), Query Frame = -2 Query: 226 DIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA---EGR----------KYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 678 D + + ++ D L+ F+ PE+L + + K + ++ L + HL RF + + K++ + FPL+L + L T + EG+ KY L A + HHG S GHYT+ R DQW DDA +T +L+ + Y+LFY Sbjct: 540 DDHIPGIPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPFLASTKESRMKEGQPPTDCVPNENKYSLFAVINHHGTLES-GHYTSFIRQQKDQWFSCDDAIITKATIEDLLYSEGYLLFY 703
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP21_HUMAN (Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 60/193 (31.09%), Postives = 86/193 (44.56%), Query Frame = -2 Query: 223 SALSDIFGGQLKSVVKAHG-NKASATVQPFLLLHIDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 780 S + D+F GQLKS +K S T + F L + I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + A Y+L A H G GHYT R W ++D+ V+ + ++V + YVLFY+ Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 556
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP21_BOVIN (Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 60/193 (31.09%), Postives = 86/193 (44.56%), Query Frame = -2 Query: 223 SALSDIFGGQLKSVVKAHG-NKASATVQPFLLLHIDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 780 S + D+F GQLKS +K S T + F L + I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + A Y+L A H G GHYT R W ++D+ V+ + ++V + YVLFY+ Sbjct: 368 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 556
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP12_YEAST (Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces cerevisiae GN=UBP12 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 51/155 (32.90%), Postives = 73/155 (47.10%), Query Frame = -2 Query: 226 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK------KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL-QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 666 E T++D L+LFS PE L T + T K K +++ IL++HL RF S K+ +V FP+ L L R ++ G Y+L A H+G GHYT + F D +W +FDD+ VT + AY+LFY Sbjct: 959 ERTITLDDCLQLFSKPEIL-----GLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLSRYVVYKDDPRGLIYDLYAVDNHYG-GLGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFY 1107
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP21_MOUSE (Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11 Identity = 60/193 (31.09%), Postives = 86/193 (44.56%), Query Frame = -2 Query: 223 SALSDIFGGQLKSVVKAHG-NKASATVQPFLLLHIDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 780 S + D+F GQLKS +K S T + F L + I ++ ++ D LF+ E LE T + K + +Q +IL+LHL RFS K V FPLQ L LG + A Y+L A H G GHYT R W ++D+ V+ + ++V + YVLFY+ Sbjct: 369 SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQVASSEGYVLFYQ 557
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP8_ARATH (Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana GN=UBP8 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 43/117 (36.75%), Postives = 57/117 (48.72%), Query Frame = -2 Query: 217 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 564 A K + + L +IL++HL RFSY KL V FPL L L + +Y L A H+G GHYT + D+W FDD+ V I K+ AYVLFYK++ Sbjct: 754 AIKKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYG-SMGGGHYTAYVHHGGDRWYDFDDSHVHQISQEKIKTSAAYVLFYKRL 869
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP5_ARATH (Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana GN=UBP5 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11 Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = -2 Query: 220 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL-QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 564 A K + + L ++L++HL RFSY KL V FP+ L L + + ++ + YEL A H+G GHYT + +D +W +FDD+ ++ I V AYVLFY++ Sbjct: 800 ASKKLDLWRLPEVLVIHLKRFSYSRSMKHKLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYG-GMGSGHYTAHIKLLDDSRWYNFDDSHISHINEDDVKSGAAYVLFYRR 915
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP46_DANRE (Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11 Identity = 64/203 (31.53%), Postives = 93/203 (45.81%), Query Frame = -2 Query: 223 PSALSDIFGGQLKSVVKA-HGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 783 P+ + +IF G L + + + S+ + FL L +D+ E +I LR FS E L Y+ A+K ++++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+LVA V H G P++GHY T + + WL FDD V I + + Y+LFY+ Sbjct: 169 PTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLD-RMYDLVAVVVHCGSGPNRGHYITIVK-SHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP12_HUMAN (Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11 Identity = 65/203 (32.02%), Postives = 92/203 (45.32%), Query Frame = -2 Query: 223 PSALSDIFGGQLKSVVKAHGNKA-SATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYVLFYK 783 P+ + +IF G L + + + S+ + FL L +D+ E +I LR FS E L Y+ A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+LVA V H G P++GHY + +D WL FDD V I + + Y+LFY+ Sbjct: 169 PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPD-RMYDLVAVVVHCGSGPNRGHYIAIVK-SHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQ 367 The following BLAST results are available for this feature:
BLAST of CV884835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884835 ID=CV884835; Name=CV884835; organism=Citrus sinensis; type=EST; length=883bpback to top |