CV884835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP24_ARATH (Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana GN=UBP24 PE=1 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 1.059e-86 Identity = 164/223 (73.54%), Postives = 185/223 (82.96%), Query Frame = -2 Query: 217 ANTALVSLAEED--EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAHGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 879 + ++++S A +D EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA G KASATVQP+LLLH+DI+ + V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKL K V+FPL+L L R LV+ S E +YELVAT+THHG DPSKGHYTTDAR N QWL FDDASVT IGT VLHDQAYVLFYKQV Sbjct: 329 SKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBPB_DICDI (Ubiquitin hydrolase B OS=Dictyostelium discoideum GN=ubpB PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.511e-37 Identity = 90/214 (42.06%), Postives = 129/214 (60.28%), Query Frame = -2 Query: 217 EDEWETVGPKNKSAV-TRTQSFLPSA-LSDIFGGQLKSVVKAHGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 849 +D WE VG K K+A+ T +Q LP +S IF G L+S G+K S TV+PF LH+DI E ++++EDAL+ F PE +EGY T ST ++A KS ++L +ILI+H RF++ S S KL K +RFP QL L + +KY L + V+HHGR S+GHYT D + QW+ +DD++ T + VL+ +AY+L Y+ V Sbjct: 242 DDNWEVVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEEINSLEDALKFFMKPEIIEGY-TCSTKKI-EISASKSWSFESLPRILIVHFKRFAFESDTSKKLDKLIRFPTQLSLS---TASNHQTQKKYSLFSVVSHHGRGLSQGHYTCDIYQPQQAQWIRYDDSTFTEVKEQDVLNREAYLLLYQLV 450
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP10_HUMAN (Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36 Identity = 86/223 (38.57%), Postives = 129/223 (57.85%), Query Frame = -2 Query: 217 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAHGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTTDARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 849 EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV +K SAT+QPF L +DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYTTD + WL DD +V I +V+ AY+L+Y++V Sbjct: 577 EDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP10_MOUSE (Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.451e-35 Identity = 86/223 (38.57%), Postives = 128/223 (57.40%), Query Frame = -2 Query: 217 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAHGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTTDARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 849 EDEWE VGPKNK+++TR F+ + ++ IFGG ++SVV +K SAT+Q F L +DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYTTD + WL DD +V I +V+ AY+L+Y++V Sbjct: 571 EDEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP3_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 3 OS=Schizosaccharomyces pombe GN=ubp3 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.900e-27 Identity = 80/233 (34.33%), Postives = 120/233 (51.50%), Query Frame = -2 Query: 226 SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAHGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTTDARYFNDQ-WLHFDDASVTAI--------------GTSKVLHDQ--AYVLFY 861 S E W VG K + R+ + S +S IFGGQL+S ++ + S ++PF L +DI +E +H++ DAL +APE L + +S G VTA K + I++L +LILHL RF Y + G T K +K + +P +L + +++ +PS G +Y+L A V HHG S GHYT D + + W DD + + SK+ H AY+LFY Sbjct: 281 SSVEASGWTEVGKNKKPVIARSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAEDIHSVIDALEHMTAPEILPEWHSSK----GNVTATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSIPQNVF-SPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDVENSELSADPSLSKLGHGDRVAYLLFY 508
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP3_YEAST (Ubiquitin carboxyl-terminal hydrolase 3 OS=Saccharomyces cerevisiae GN=UBP3 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.249e-20 Identity = 73/250 (29.20%), Postives = 117/250 (46.80%), Query Frame = -2 Query: 220 EEDEWETV------GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAHGNK--ASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS---------------TKLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTTDARYF-NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 852 EE+ W V G K K+A RT +PS +S +FGGQ +SV+ NK S T+ PF + +DI V+ +E A + FS E L SS+GN V AKK I L ++L++ RFS+ + + K+ K +++ +L++ + + T + R+Y+L + HHG GHYT D + +++W DD ++T + VL AY+L Y++ Sbjct: 665 EENGWHEVSGSSKRGKKTKTAAKRTVEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELLP--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP8_HUMAN (Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.126e-18 Identity = 63/188 (33.51%), Postives = 94/188 (50.00%), Query Frame = -2 Query: 226 SALSDIFGGQLKSVVKAHG-NKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 780 S + +F GQ KS V+ +K S T + F+ L + + S + T++D LRLFS E L + R + + K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY L + H+G GHYT + +W FDD V+ I S V AY+LFY Sbjct: 920 SIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP8_MOUSE (Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17 Identity = 62/188 (32.98%), Postives = 93/188 (49.47%), Query Frame = -2 Query: 226 SALSDIFGGQLKSVVKAHG-NKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 780 S + +F GQ KS V+ + S T + F+ L + + S + T++D LRLFS E L + R + + K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY L + H+G GHYT + +W FDD V+ I S V AY+LFY Sbjct: 882 SIIVALFQGQFKSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: U17L5_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo sapiens GN=USP17L5 PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 5.186e-17 Identity = 64/187 (34.22%), Postives = 93/187 (49.73%), Query Frame = -2 Query: 220 LSDIFGGQLKSVVKA-HGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 774 + IFGG +S +K H + S T P+L + +DI +A +++ AL + PE L G G A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q Sbjct: 193 IHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLAKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
BLAST of CV884835 vs. ExPASy Swiss-Prot
Match: UBP17_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17 OS=Homo sapiens GN=USP17A PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.155e-16 Identity = 64/187 (34.22%), Postives = 92/187 (49.20%), Query Frame = -2 Query: 220 LSDIFGGQLKSVVKA-HGNKASATVQPFLLLHIDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTTDARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 774 + IFGG +S +K H + S T P+L + +DI +A +++ AL PE L G G A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q Sbjct: 193 IHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374 The following BLAST results are available for this feature:
BLAST of CV884835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884835 ID=CV884835; Name=CV884835; organism=Citrus sinensis; type=EST; length=883bpback to top |