EY664923

Overview
NameEY664923
Unique NameEY664923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 4.682e-101
Identity = 171/225 (76.00%), Postives = 193/225 (85.78%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+DICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHF L +YAP++SAEKAYHEQLSV EIT++ FEP+S M KCDPRHGKYMACC++YRGDVVPKDVN A+A IKTK T+QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIVSAEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2)

HSP 1 Score: 367.466 bits (942), Expect = 6.115e-101
Identity = 172/225 (76.44%), Postives = 193/225 (85.78%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+DICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVIS+EKAYHEQL+V EITN  FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISSEKAYHEQLTVSEITNTCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 6.115e-101
Identity = 172/225 (76.44%), Postives = 194/225 (86.22%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+DICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITN+ FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTK ++QFVDWCPTGFK GINYQPPTVV GGDLA V R VCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA
Sbjct:  203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVAGGDLAKVQRIVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDIAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_HOMAM (Tubulin alpha-1 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 6.115e-101
Identity = 173/225 (76.89%), Postives = 193/225 (85.78%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+DICRR+LDIERP+YTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK T+QFVDWCPTGFK GINYQPPTVVPG DLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EF+E+REDLAA
Sbjct:  203 MVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIANIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGADLAKVSRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_ENTDO (Tubulin alpha chain OS=Enteroctopus dofleini PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.362e-100
Identity = 170/225 (75.56%), Postives = 195/225 (86.67%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+DIC+R+LDIERP+YTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+ISAEKAYHEQL+V E+T+A FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TAVAE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  203 MVDNEAIYDICKRNLDIERPSYTNLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLAVAEVTSACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 5.177e-100
Identity = 170/225 (75.56%), Postives = 193/225 (85.78%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+DICRR+LDIERPTY NLNR             RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVIS EKAYHEQL+V EITNA FEP++ M KCDPR GKYMACC++YRGDVVPKDVNAA+ATIKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EF+E+REDLAA
Sbjct:  203 MVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_HAECO (Tubulin alpha chain OS=Haemonchus contortus PE=2 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.967e-99
Identity = 171/227 (75.33%), Postives = 194/227 (85.46%), Query Frame = 2
Query:   11 SVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            S ++DNEAI+DICRR+LDIERP+YTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHF L++++PVISAEKAYHEQLSV EITN  FEP + M KCDPRHGKYMA CL++RGDVVPKDVNAA+ATIKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  201 SFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 1.967e-99
Identity = 178/230 (77.39%), Postives = 191/230 (83.04%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+V+LDNEA++DICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYP +        P   AEKAYHEQLSV EITN+ FEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK T+QFVDWCPTGFKCGINYQPPTVVP GD A V RAVCMISN+TA+AEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE REDLAA
Sbjct:  198 TDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPSVIIR-----PSTPAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPSGDPAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEVREDLAA 422          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 2.569e-99
Identity = 175/230 (76.09%), Postives = 194/230 (84.35%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+V+LDNEAI++IC+RSL+IERPTYTNLNR             RFDGA+NVDITEFQTNLVPYPRIHFMLSS APVIS E A HEQ S  EITNA FEP+SMMAKCDPR GKYMACCLM+RGDV PKDVN +VA IKTK T+QFVDWCPTGFKCGINYQPPTVVP GDLA V RAVCMISN+TA++EVFSRI+  FDLMY+K AFVHWYVGE M E EF+E+RED+AA
Sbjct:  198 TDVAVVLDNEAIYEICQRSLNIERPTYTNLNRLIAQVISSITASLRFDGALNVDITEFQTNLVPYPRIHFMLSSLAPVISLEMANHEQYSTAEITNAAFEPNSMMAKCDPRRGKYMACCLMFRGDVAPKDVNGSVAAIKTKKTIQFVDWCPTGFKCGINYQPPTVVPDGDLAKVDRAVCMISNSTAISEVFSRINKKFDLMYSKRAFVHWYVGEGMEEGEFNEAREDMAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA3_CHICK (Tubulin alpha-3 chain (Fragment) OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 1.665e-98
Identity = 170/227 (74.89%), Postives = 192/227 (84.58%), Query Frame = 2
Query:   11 SVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            S ++DNEAI+DIC R+LDIERPTYTNLNR             RF+GA+NVD+ EFQTNLVPYPRIHF L++YA +ISAEKAYHEQLSVPEITNA FE S+ M KCDPR GKYMACCL+YRGDVVPKDVNAA+A IKT+ ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:   76 SFMVDNEAIYDICNRNLDIERPTYTNLNRLIGQIVSSVTASLRFNGALNVDLIEFQTNLVPYPRIHFPLTTYARIISAEKAYHEQLSVPEITNACFEFSNQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIAAIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 302          
The following BLAST results are available for this feature:
BLAST of EY664923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
TBA8_RAT4.682e-10176.00Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba... [more]
TBA_LEPDS6.115e-10176.44Tubulin alpha chain OS=Lepidoglyphus destructor PE... [more]
TBA5_CHICK6.115e-10176.44Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1[more]
TBA1_HOMAM6.115e-10176.89Tubulin alpha-1 chain OS=Homarus americanus PE=2 S... [more]
TBA_ENTDO1.362e-10075.56Tubulin alpha chain OS=Enteroctopus dofleini PE=2 ... [more]
TBA2_DROME5.177e-10075.56Tubulin alpha-2 chain OS=Drosophila melanogaster G... [more]
TBA_HAECO1.967e-9975.33Tubulin alpha chain OS=Haemonchus contortus PE=2 S... [more]
TBA1_STYLE1.967e-9977.39Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 S... [more]
TBAN_GUITH2.569e-9976.09Tubulin alpha chain, nucleomorph OS=Guillardia the... [more]
TBA3_CHICK1.665e-9874.89Tubulin alpha-3 chain (Fragment) OS=Gallus gallus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664923 ID=EY664923; Name=EY664923; organism=Citrus sinensis; type=EST; length=919bp
CACATATGTTTCTGTGCTATTGGACAATGAAGCTATTCATGACATCTGCA
GGAGATCCCTGGATATTGAGAGGCCAACTTACACTAATTTGAATCGATTG
ATATCTCAAATCATATCATCTTTGACAACTTCATTGAGGTTTGATGGAGC
TATTAATGTTGATATTACAGAGTTCCAGACCAACCTTGTACCGTATCCTC
GTATCCATTTCATGCTTTCATCATATGCCCCTGTCATCTCTGCTGAAAAA
GCATACCATGAACAGCTTTCAGTTCCAGAGATCACAAATGCAGTCTTTGA
GCCCTCAAGCATGATGGCCAAATGTGACCCCAGGCACGGGAAGTACATGG
CTTGCTGCTTGATGTACCGAGGAGATGTTGTCCCCAAGGATGTTAATGCC
GCTGTTGCCACTATCAAAACTAAGATGACCGTGCAATTTGTTGACTGGTG
CCCAACTGGCTTCAAATGTGGTATTAACTATCAGCCTCCAACTGTTGTAC
CTGGAGGTGACCTGGCCAATGTTCATCGAGCTGTTTGCATGATCAGCAAC
AACACAGCAGTGGCTGAAGTGTTCTCTCGCATTGATCACATATTCGATCT
CATGTATGCCAAGATGGCATTCGTCCACTGGTACGTTGGTGAATGCATGG
ANGAATGTGAATTCTCAGAATCACGTGAAGATCTGGCTGCTCTTGAGAAA
GATATGANGAAAGTTGTGCANAAGGAGTTGATGATGAAGATGATGGNGAA
AAATATTGATGTACTGCTTCTGCTGTAAACTATGAAGATGAGAAATTTGT
ACATTTTGCATGGGCATTATGTNGAAATTNGTGAGAATTGTGAGGTTCTG
TACTCATGCCTAGTCCCTGGCCCTTTATGGGCTTGTTCTTTCGGTAGACT
ATTTCCTTTGCTGTGGACC
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