EY664923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 9.718e-115 Identity = 203/230 (88.26%), Postives = 208/230 (90.43%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK TVQFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 9.718e-115 Identity = 203/230 (88.26%), Postives = 208/230 (90.43%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK TVQFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 9.718e-115 Identity = 203/230 (88.26%), Postives = 208/230 (90.43%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK TVQFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_ORYSJ (Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica GN=TUBA1 PE=1 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 9.718e-115 Identity = 203/230 (88.26%), Postives = 208/230 (90.43%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK TVQFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1) HSP 1 Score: 413.305 bits (1061), Expect = 9.718e-115 Identity = 203/230 (88.26%), Postives = 208/230 (90.43%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK TVQFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1) HSP 1 Score: 410.223 bits (1053), Expect = 6.417e-114 Identity = 202/230 (87.83%), Postives = 206/230 (89.57%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSVPEITNAVFEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTK TVQFVDWCPTGFKCGINYQPPTVVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427 HSP 2 Score: 20.7866 bits (42), Expect = 6.417e-114 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = 1 Query: 703 YXESCAXGVDDE-DDGEKY 756 Y E A G DDE D+GE Y Sbjct: 432 YEEVGAEGGDDEEDEGEDY 450
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA2_ANEPH (Tubulin alpha-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBA2 PE=2 SV=1) HSP 1 Score: 406.757 bits (1044), Expect = 9.096e-113 Identity = 201/231 (87.01%), Postives = 208/231 (90.04%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSL-DIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSL DIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK TVQFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK+AFVHWYVGE M E EFSE+REDLAA Sbjct: 113 TDVAVLLDNEAIYDICRRSLLDIERPTYTNLNRLVSQIISSLTTSLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKLAFVHWYVGEGMEEGEFSEAREDLAA 343
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 2.026e-112 Identity = 200/229 (87.34%), Postives = 205/229 (89.52%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLA 688 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTK TVQFVD CPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVVTIKTKRTVQFVDXCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLA 426
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 3.456e-112 Identity = 197/230 (85.65%), Postives = 206/230 (89.57%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK T+QFVDWCPTGFKCGINYQPPTVVPGGDLA V RAVCMISN+T+VAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 3.456e-112 Identity = 197/230 (85.65%), Postives = 206/230 (89.57%), Query Frame = 2 Query: 2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 T V+VLLDNEAI+DICRRSLDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK T+QFVDWCPTGFKCGINYQPPTVVPGGDLA V RAVCMISN+T+VAEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427 The following BLAST results are available for this feature:
BLAST of EY664923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664923 ID=EY664923; Name=EY664923; organism=Citrus sinensis; type=EST; length=919bpback to top |