EY664923

Overview
NameEY664923
Unique NameEY664923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA3_YEAST (Tubulin alpha-3 chain OS=Saccharomyces cerevisiae GN=TUB3 PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.850e-81
Identity = 143/225 (63.56%), Postives = 172/225 (76.44%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+DIC+R+L I RP+++NLN              RFDG++NVD+ EFQTNLVPYPRIHF L SYAP++S ++A HE  SV EITNA FEP + M KCDP  GKYMA CL+YRGDVV +DV  AV  +K K TVQ VDWCPTGFK GI Y+PP+V+P  +LANV RAVCM+SN TA+A+ + RID  FDLMYAK AFVHWYVGE M E EF+E+REDLAA
Sbjct:  204 MVDNEAIYDICKRNLGISRPSFSNLNGLIAQVISSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPILSKKRATHESNSVSEITNACFEPGNQMVKCDPTKGKYMANCLLYRGDVVTRDVQRAVEQVKNKKTVQMVDWCPTGFKIGICYEPPSVIPSSELANVDRAVCMLSNTTAIADAWKRIDQKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAA 428          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBAB_SCHCO (Tubulin alpha-1B chain OS=Schizophyllum commune GN=TUB-1B PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 4.121e-81
Identity = 140/227 (61.67%), Postives = 175/227 (77.09%), Query Frame = 2
Query:   11 SVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            S ++DNEAI+DIC+++L + +P +TNLNR             RFDG++NVD+ EFQTNLVP+PRIHF L+SYAP++SA +  HEQ SV E+T + FE  + M KCD + GKYMACCL+YRGDVVPKD  AAVA+IKTK T+QFVDWCPTGFK G+  + P  VPGGDLA V R++CM+SN TA+A  ++R+D+ FDLMY K AFVHWYVGE M E EFSE+REDLAA
Sbjct:  199 SFMVDNEAIYDICKKNLGVAQPGFTNLNRLIAQVVSSITASLRFDGSLNVDLNEFQTNLVPFPRIHFPLASYAPLLSAPRRQHEQNSVEEMTFSCFESGNQMVKCDAKDGKYMACCLLYRGDVVPKDTQAAVASIKTKRTIQFVDWCPTGFKLGVCNEAPATVPGGDLAKVPRSLCMLSNTTAIAAAWNRLDYKFDLMYRKRAFVHWYVGEAMEEGEFSEAREDLAA 425          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_CANAL (Tubulin alpha chain OS=Candida albicans GN=TUB1 PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.199e-80
Identity = 143/225 (63.56%), Postives = 170/225 (75.56%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            ++DNEAI+D+CRR+LDI RP +++LN              RFDG++NVD+ EFQTNLVPYPRIHF L SYAPV S  +A HE  SV EIT + FEP + M KCDPR GKYMA CL+YRGDVV +DV  AVA +K+K TVQ VDWCPTGFK GI YQPPT + G +LA+  RAVCM+SN TA+AE + RID  FDLMY+K AFVHWYVGE M E EF+E+REDLAA
Sbjct:  204 MVDNEAIYDMCRRNLDIARPNFSSLNNLIAQVVSSVTASLRFDGSLNVDLNEFQTNLVPYPRIHFPLVSYAPVFSKSRATHEANSVSEITQSCFEPGNQMVKCDPRTGKYMATCLLYRGDVVTRDVQNAVAQVKSKKTVQLVDWCPTGFKIGICYQPPTAIKGSELASASRAVCMLSNTTAIAEAWRRIDRKFDLMYSKRAFVHWYVGEGMEEGEFTEAREDLAA 428          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA4_DROME (Tubulin alpha-4 chain OS=Drosophila melanogaster GN=alphaTub67C PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.015e-79
Identity = 136/224 (60.71%), Postives = 171/224 (76.34%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLA 688
            ++DNEAI+DIC  SL ++RP Y NLNR             RF G++NVD+ EFQTNLVP+PRIHF L +YAP++SAE++ HEQ ++  +TNA FE S+MM KCDPR GK+MACC++YRGDVVPKDVNAAV+ IK+K  +QFVDWCPTGFK GINY+ P  VP GDLA   RA CM+SN TA++  FS + + FDLM+ K AFVHWYVGE M E EF+E+RE++A
Sbjct:  214 MVDNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNVDLNEFQTNLVPFPRIHFPLVAYAPLMSAERSAHEQHAITTLTNACFESSNMMVKCDPRAGKFMACCMLYRGDVVPKDVNAAVSAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDLMFKKRAFVHWYVGEGMEEGEFTEARENIA 437          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_DICDI (Tubulin alpha chain OS=Dictyostelium discoideum GN=tubA PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.610e-77
Identity = 137/232 (59.05%), Postives = 173/232 (74.57%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMT--VQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T VS +LDNEAI++IC+ SLDIE+PTYTNLNR             RF G +N+DI + QTNLVP+PR+HF+L SYAPVIS EKA+HE ++V  IT+AVF   ++MAKC P  GKYMACCLMYRGD+VPK+   AV  I+++ +  V FVDW PTGFKCGIN Q P      ++A V ++VCM+SN TA+++VFSRI+H FDLM+ K AFVHWYVGE M E EF+E+R+DL A
Sbjct:  205 TDVSFMLDNEAIYNICKNSLDIEKPTYTNLNRLIAQVISSLTSSLRFPGQLNLDINDIQTNLVPFPRLHFVLCSYAPVISREKAHHETITVDNITSAVFSEKNIMAKCQPNLGKYMACCLMYRGDIVPKEAQKAVQNIRSEKSRNVSFVDWSPTGFKCGINNQAPVSTKDSEMAEVKKSVCMLSNTTAISQVFSRINHKFDLMFVKRAFVHWYVGEGMEEGEFAEARDDLLA 436          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_NEUCR (Tubulin alpha-A chain OS=Neurospora crassa GN=tba-1 PE=2 SV=3)

HSP 1 Score: 287.345 bits (734), Expect = 8.042e-77
Identity = 139/233 (59.66%), Postives = 172/233 (73.82%), Query Frame = 2
Query:    8 VSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVP-----GGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            V+ L+DNEA++DICRR+LDI RP+Y +LNR             RFDGA+NVD+ EFQTNLVP+PR+H+ L SYAPVISA K+ HE     E+T   FEP++ M  CDPR+GKYMA  L+YRGDVVP+D +AAVA +K K +   V+WCPTGFK GIN+Q P  VP      G LA+V R+V M+SN TA+AE +SR+DH FDLMY+K AFVHWYVGE M E EFSE+REDLA+
Sbjct:  201 VTFLVDNEAVYDICRRNLDIPRPSYEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRVHYPLISYAPVISATKSAHESFKTSELTLQCFEPNNQMVVCDPRNGKYMAVALLYRGDVVPRDTSAAVAALKAKSSFNLVEWCPTGFKIGINHQKPMSVPTASPADGGLASVDRSVSMLSNTTAIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAS 433          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_ENCCU (Tubulin alpha chain OS=Encephalitozoon cuniculi GN=TUB1 PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.372e-76
Identity = 137/226 (60.62%), Postives = 172/226 (76.11%), Query Frame = 2
Query:   11 SVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLA 688
            S L+DNEAI+D+CR +L I+RP YT++NR             RF G++NVD+TEFQTNLVPYPRIHF L +Y+P++S EKA HE+LSV EITNA FEP + M +CD R GKYMACCL++RGDV PK+ N A A +K K T QFV+WCPTGFK GIN + PTV+ G  +A V RAVC +SN TA++E + R+++ FDLM++K AFVHWYVGE M E EFSE+REDLA
Sbjct:  198 SFLVDNEAIYDMCR-NLGIQRPYYTDINRVIAQVVSSITASLRFPGSLNVDLTEFQTNLVPYPRIHFPLVAYSPMLSKEKAAHEKLSVQEITNACFEPQNQMVRCDTRKGKYMACCLLFRGDVNPKEANNATANVKAKRTNQFVEWCPTGFKVGINSRKPTVLDGEAMAEVSRAVCALSNTTAISEAWKRLNNKFDLMFSKRAFVHWYVGEGMEEGEFSEAREDLA 422          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 8.892e-76
Identity = 133/225 (59.11%), Postives = 168/225 (74.67%), Query Frame = 2
Query:   17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            L+DNEA++DICRR+LDI RP++ +LNR             RFDGA+NVD+ EFQTNLVP+PRIH+ L SYAPVIS+ ++ HE   V ++T    EP++ M  CDPR+GKYMA  L+YRGD VP+D   A+A++K K +   V+WCPTGFK GINYQ P  VPG +LA V R+V M+SN TA++E +SR+DH FDLMY+K AFVHWYVGE M E EFSE+REDLAA
Sbjct:  205 LVDNEAVYDICRRNLDIPRPSFEHLNRLIAQVVSSITSSLRFDGALNVDLNEFQTNLVPFPRIHYPLISYAPVISSNRSSHESFKVQDLTLQCAEPNNQMVVCDPRNGKYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 429          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_AJECA (Tubulin alpha chain (Fragment) OS=Ajellomyces capsulata GN=TUB1 PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.413e-75
Identity = 140/220 (63.64%), Postives = 167/220 (75.91%), Query Frame = 2
Query:    8 VSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXR-FDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEF 664
            V  ++DNEAI+DICRR+L IERP+Y N NR               FD A+NVD+ EFQTNLVPYPRIHF L+SY+PV+SA KA HE  SV E+T   FEP++ M KCDPR+GKYMA CL+YRGDVVPKDV+A  AT+KTK TVQFVD  PTGFK GI YQPPT+VP GDLA V+RA CM+SN TA++E ++ + H FDL+Y+K AFVHWYVGE M E EF
Sbjct:  200 VQFMVDNEAIYDICRRNLGIERPSYENSNRLMAQGQSPITAIMLLFDCALNVDLNEFQTNLVPYPRIHFPLASYSPVVSAGKASHESNSVMEVTIVCFEPNNQMVKCDPRNGKYMATCLLYRGDVVPKDVHAVAATLKTKRTVQFVDLQPTGFKIGICYQPPTMVPNGDLAKVNRA-CMLSNTTAISEAWTALSHKFDLIYSKRAFVHWYVGEGMEEGEF 418          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 2.050e-72
Identity = 132/225 (58.67%), Postives = 165/225 (73.33%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK--MTVQFVDWCPTGFKCGINYQPPTVV---PGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECE 661
            T VS +LDNEAI++IC++SLDIE+PTYTNLNR             RF G +N+DI + QTNLVP+PR+HF+L SYAPVIS EK+ HE ++V  ITN+VF  +++MAKC P  GKYMACCLMYRG++VPK+   AV  I+ +   TV FVDW PTGFKCGIN   PT V    G ++A   ++VCM+SN TA+++VFSRI+H FDLMY K AFVHWYVGE M E E
Sbjct:  107 TDVSFMLDNEAIYNICKKSLDIEKPTYTNLNRLIAQVISSLTSSLRFPGPLNLDINDIQTNLVPFPRLHFVLCSYAPVISKEKSEHENITVDAITNSVFSENNIMAKCQPHLGKYMACCLMYRGNIVPKEAQKAVQNIRNEKSKTVSFVDWSPTGFKCGINNSKPTTVLGENGDNMARTEKSVCMLSNTTAISQVFSRINHKFDLMYIKRAFVHWYVGEGMEEGE 331          
The following BLAST results are available for this feature:
BLAST of EY664923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
TBA3_YEAST1.850e-8163.56Tubulin alpha-3 chain OS=Saccharomyces cerevisiae ... [more]
TBAB_SCHCO4.121e-8161.67Tubulin alpha-1B chain OS=Schizophyllum commune GN... [more]
TBA_CANAL1.199e-8063.56Tubulin alpha chain OS=Candida albicans GN=TUB1 PE... [more]
TBA4_DROME1.015e-7960.71Tubulin alpha-4 chain OS=Drosophila melanogaster G... [more]
TBA_DICDI3.610e-7759.05Tubulin alpha chain OS=Dictyostelium discoideum GN... [more]
TBA1_NEUCR8.042e-7759.66Tubulin alpha-A chain OS=Neurospora crassa GN=tba-... [more]
TBA_ENCCU1.372e-7660.62Tubulin alpha chain OS=Encephalitozoon cuniculi GN... [more]
TBA2_EMENI8.892e-7659.11Tubulin alpha-2 chain OS=Emericella nidulans GN=tu... [more]
TBA_AJECA4.413e-7563.64Tubulin alpha chain (Fragment) OS=Ajellomyces caps... [more]
TBA_DICPU2.050e-7258.67Tubulin alpha chain (Fragment) OS=Dictyostelium pu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664923 ID=EY664923; Name=EY664923; organism=Citrus sinensis; type=EST; length=919bp
CACATATGTTTCTGTGCTATTGGACAATGAAGCTATTCATGACATCTGCA
GGAGATCCCTGGATATTGAGAGGCCAACTTACACTAATTTGAATCGATTG
ATATCTCAAATCATATCATCTTTGACAACTTCATTGAGGTTTGATGGAGC
TATTAATGTTGATATTACAGAGTTCCAGACCAACCTTGTACCGTATCCTC
GTATCCATTTCATGCTTTCATCATATGCCCCTGTCATCTCTGCTGAAAAA
GCATACCATGAACAGCTTTCAGTTCCAGAGATCACAAATGCAGTCTTTGA
GCCCTCAAGCATGATGGCCAAATGTGACCCCAGGCACGGGAAGTACATGG
CTTGCTGCTTGATGTACCGAGGAGATGTTGTCCCCAAGGATGTTAATGCC
GCTGTTGCCACTATCAAAACTAAGATGACCGTGCAATTTGTTGACTGGTG
CCCAACTGGCTTCAAATGTGGTATTAACTATCAGCCTCCAACTGTTGTAC
CTGGAGGTGACCTGGCCAATGTTCATCGAGCTGTTTGCATGATCAGCAAC
AACACAGCAGTGGCTGAAGTGTTCTCTCGCATTGATCACATATTCGATCT
CATGTATGCCAAGATGGCATTCGTCCACTGGTACGTTGGTGAATGCATGG
ANGAATGTGAATTCTCAGAATCACGTGAAGATCTGGCTGCTCTTGAGAAA
GATATGANGAAAGTTGTGCANAAGGAGTTGATGATGAAGATGATGGNGAA
AAATATTGATGTACTGCTTCTGCTGTAAACTATGAAGATGAGAAATTTGT
ACATTTTGCATGGGCATTATGTNGAAATTNGTGAGAATTGTGAGGTTCTG
TACTCATGCCTAGTCCCTGGCCCTTTATGGGCTTGTTCTTTCGGTAGACT
ATTTCCTTTGCTGTGGACC
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