EY664923

Overview
NameEY664923
Unique NameEY664923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 9.412e-110
Identity = 192/230 (83.48%), Postives = 204/230 (88.70%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+V+LDNEAI+DICRRSLDI+RPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHFML SYAPVISAEKAYHEQLSV EITN+ FEP+SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK T+QFVDW PTGFKCGINYQPPTVVPGGDLA V RAVCMISN+TA+AEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVAVMLDNEAIYDICRRSLDIQRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_EUPOC (Tubulin alpha chain OS=Euplotes octocarinatus PE=3 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.606e-109
Identity = 191/230 (83.04%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+V+LDNEA++DICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEP+SMMAKCDPRHGKYMACC+MYRGDVVPKDVNAAVATIKTK T+QFVDW PTGFKCGINYQPPTVVPGGDLA V RAVCMISN+TA+AEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVAVMLDNEAVYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSSFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_DAUCA (Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 2.057e-109
Identity = 193/230 (83.91%), Postives = 203/230 (88.26%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T VSVLLDNEAI+DIC+RSLDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTK T+QFVDWCPTGFKCGINYQ PTVVPGGDLA V RAVCMISN+T+VAEVFSRID  FDLMY+K AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVSVLLDNEAIYDICKRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDTKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427          

HSP 2 Score: 20.7866 bits (42), Expect = 2.057e-109
Identity = 7/9 (77.78%), Postives = 8/9 (88.89%), Query Frame = 1
Query:  730 DDEDDGEKY 756
            DDED+GE Y
Sbjct:  443 DDEDEGEDY 451          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_PLAFK (Tubulin alpha chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 2.097e-109
Identity = 189/230 (82.17%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+++LDNEAI+DICRR+LDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPV+SAEKAYHEQLSV EITN+ FEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK T+QFVDWCPTGFKCGINYQPPTVVPGGDLA V RAVCMISN+TA+AEVFSR+D  FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVAIMLDNEAIYDICRRNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA2_ELEIN (Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 PE=2 SV=1)

HSP 1 Score: 395.586 bits (1015), Expect = 2.097e-109
Identity = 195/230 (84.78%), Postives = 202/230 (87.83%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V VLLDNEAI+DIC+RSLDIERPTYTNLNR             RFDGAINVDITEFQTNLVPYPRIHFMLSSYAP+IS EKAYHEQ SVPEITN+VFE SS+MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKTK TVQFVDWCPTGFKCGINYQPPTVVPGGDLA V RAVCMISNNTAVAEVFSRID  FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAYHEQHSVPEITNSVFESSSVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 4.671e-109
Identity = 192/230 (83.48%), Postives = 203/230 (88.26%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+VLLDNEAI+DICRRSLDIERPTYTNLNR             RFDGA+NVD+ EFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV EITN+ FEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK T+QFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISN+T+V EVFSRID  FDLMY+K AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_ARATH (Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 4.671e-109
Identity = 192/230 (83.48%), Postives = 201/230 (87.39%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V VLLDNEAI+DICRRSLDIERPTY+NLNR             RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS+ KAYHEQ SVPEIT +VFEPS+MMAKCDPRHGKYMACCLMYRGDVVPKDVN AVA IK K T+QFVDWCPTGFKCGINYQPP+VVPGGDLA V RAVCMISNNTAVAEVFSRIDH FDLMY+K AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_PLAYO (Tubulin alpha chain OS=Plasmodium yoelii yoelii GN=PY01155 PE=2 SV=2)

HSP 1 Score: 393.275 bits (1009), Expect = 1.041e-108
Identity = 187/230 (81.30%), Postives = 205/230 (89.13%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+++LDNEAI+DIC+++LDIERPTYTNLNR             RFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPV+SAEKAYHEQLSV EITN+ FEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK T+QFVDWCPTGFKCGINYQPPTVVPGGDLA V RAVCMISN+TA+AEVFSR+D  FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVAIMLDNEAIYDICKKNLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVVSAEKAYHEQLSVSEITNSAFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRMDQKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA2_CHLRE (Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii GN=TUBA2 PE=1 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 1.041e-108
Identity = 189/230 (82.17%), Postives = 202/230 (87.83%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+V+LDNEAI+DICRRSLDIERPTYTNLNR             RFDGA+NVDITEFQTNLVPYPRIHFMLSSYAP+ISAEKAYHEQLSV EITNA FEP+SMM KCDP HGKYMACCLMYRGDVVPKDVNA+VATIKTK T+QFVDWCPTGFKCGINYQPPTVVPG DLA V RAVCMISN+TA+ E+FSR+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNAAFEPASMMVKCDPLHGKYMACCLMYRGDVVPKDVNASVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGVDLAKVQRAVCMISNSTAIGEIFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 3.028e-108
Identity = 187/230 (81.30%), Postives = 203/230 (88.26%), Query Frame = 2
Query:    2 TYVSVLLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691
            T V+ +LDNEAI+DIC+R+LDI+RPTYTNLNR             RFDGA+NVDITEFQTNLVPYPRIHFML SYAPVISAEKAYHEQL+V EITN+VFEP++MMAKCDPRHGKYMACCLMYRGDVVPKDVNA+VA IKTK T+QFVDWCPTGFKCGINYQPPTVVPGGDLA V RAVCM+SN TA+AEVFSRIDH FDLMYAK AFVHWYVGE M E EFSE+REDLAA
Sbjct:  198 TDVAFMLDNEAIYDICKRALDIDRPTYTNLNRLVAQVISSLTTSLRFDGALNVDITEFQTNLVPYPRIHFMLCSYAPVISAEKAYHEQLTVAEITNSVFEPANMMAKCDPRHGKYMACCLMYRGDVVPKDVNASVAVIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427          
The following BLAST results are available for this feature:
BLAST of EY664923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
TBA13_NAEGR9.412e-11083.48Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUB... [more]
TBA_EUPOC1.606e-10983.04Tubulin alpha chain OS=Euplotes octocarinatus PE=3... [more]
TBA_DAUCA2.057e-10983.91Tubulin alpha chain OS=Daucus carota GN=TBA PE=2 S... [more]
TBA_PLAFK2.097e-10982.17Tubulin alpha chain OS=Plasmodium falciparum (isol... [more]
TBA2_ELEIN2.097e-10984.78Tubulin alpha-2 chain OS=Eleusine indica GN=TUBA2 ... [more]
TBA2_ORYSJ4.671e-10983.48Tubulin alpha-2 chain OS=Oryza sativa subsp. japon... [more]
TBA1_ARATH4.671e-10983.48Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=T... [more]
TBA_PLAYO1.041e-10881.30Tubulin alpha chain OS=Plasmodium yoelii yoelii GN... [more]
TBA2_CHLRE1.041e-10882.17Tubulin alpha-2 chain OS=Chlamydomonas reinhardtii... [more]
TBAD_PHYPO3.028e-10881.30Tubulin alpha-1A chain OS=Physarum polycephalum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-072-A02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664923 ID=EY664923; Name=EY664923; organism=Citrus sinensis; type=EST; length=919bp
CACATATGTTTCTGTGCTATTGGACAATGAAGCTATTCATGACATCTGCA
GGAGATCCCTGGATATTGAGAGGCCAACTTACACTAATTTGAATCGATTG
ATATCTCAAATCATATCATCTTTGACAACTTCATTGAGGTTTGATGGAGC
TATTAATGTTGATATTACAGAGTTCCAGACCAACCTTGTACCGTATCCTC
GTATCCATTTCATGCTTTCATCATATGCCCCTGTCATCTCTGCTGAAAAA
GCATACCATGAACAGCTTTCAGTTCCAGAGATCACAAATGCAGTCTTTGA
GCCCTCAAGCATGATGGCCAAATGTGACCCCAGGCACGGGAAGTACATGG
CTTGCTGCTTGATGTACCGAGGAGATGTTGTCCCCAAGGATGTTAATGCC
GCTGTTGCCACTATCAAAACTAAGATGACCGTGCAATTTGTTGACTGGTG
CCCAACTGGCTTCAAATGTGGTATTAACTATCAGCCTCCAACTGTTGTAC
CTGGAGGTGACCTGGCCAATGTTCATCGAGCTGTTTGCATGATCAGCAAC
AACACAGCAGTGGCTGAAGTGTTCTCTCGCATTGATCACATATTCGATCT
CATGTATGCCAAGATGGCATTCGTCCACTGGTACGTTGGTGAATGCATGG
ANGAATGTGAATTCTCAGAATCACGTGAAGATCTGGCTGCTCTTGAGAAA
GATATGANGAAAGTTGTGCANAAGGAGTTGATGATGAAGATGATGGNGAA
AAATATTGATGTACTGCTTCTGCTGTAAACTATGAAGATGAGAAATTTGT
ACATTTTGCATGGGCATTATGTNGAAATTNGTGAGAATTGTGAGGTTCTG
TACTCATGCCTAGTCCCTGGCCCTTTATGGGCTTGTTCTTTCGGTAGACT
ATTTCCTTTGCTGTGGACC
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