EY664923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA_XENTR (Tubulin alpha chain OS=Xenopus tropicalis GN=tuba PE=2 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 1.755e-102 Identity = 174/225 (77.33%), Postives = 194/225 (86.22%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK T+QFVDWCPTGFK GINYQPPT VPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427 HSP 2 Score: 21.1718 bits (43), Expect = 1.755e-102 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 Query: 703 YXESCAXGVDDEDDGEKY 756 Y E +DED+GE+Y Sbjct: 432 YEEVGIDSYEDEDEGEEY 449
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA8_CHICK (Tubulin alpha-8 chain (Fragment) OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 1.758e-102 Identity = 174/225 (77.33%), Postives = 194/225 (86.22%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L +Y+P+ISAEKAYHEQLSV EITNA FEPS+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+A IKTK T+QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 78 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYSPIISAEKAYHEQLSVSEITNACFEPSNQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 302 HSP 2 Score: 21.1718 bits (43), Expect = 1.758e-102 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 Query: 703 YXESCAXGVDDEDDGEKY 756 Y E +D ED+GE+Y Sbjct: 307 YEEVGTDSMDGEDEGEEY 324
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1_APLCA (Tubulin alpha-1 chain OS=Aplysia californica PE=2 SV=1) HSP 1 Score: 372.474 bits (955), Expect = 1.901e-102 Identity = 174/225 (77.33%), Postives = 196/225 (87.11%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERP+YTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITNA FEP++ + KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTK T+QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 203 MVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBAT_ONCMY (Tubulin alpha chain, testis-specific OS=Oncorhynchus mykiss PE=2 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 2.483e-102 Identity = 175/225 (77.78%), Postives = 194/225 (86.22%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISAEKAYHE LSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTK T+QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+REDLAA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA1A_PIG (Tubulin alpha-1A chain OS=Sus scrofa GN=TUBA1A PE=1 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 2.483e-102 Identity = 174/225 (77.33%), Postives = 195/225 (86.67%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPR HF L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ATIKTK T+QFVDWCPTGFK GINY+PPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA4A_RAT (Tubulin alpha-4A chain OS=Rattus norvegicus GN=Tuba4a PE=2 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 3.243e-102 Identity = 174/225 (77.33%), Postives = 195/225 (86.67%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA4A_MOUSE (Tubulin alpha-4A chain OS=Mus musculus GN=Tuba4a PE=1 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 3.243e-102 Identity = 174/225 (77.33%), Postives = 195/225 (86.67%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA4A_MACFA (Tubulin alpha-4A chain OS=Macaca fascicularis GN=TUBA4A PE=2 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 3.243e-102 Identity = 174/225 (77.33%), Postives = 195/225 (86.67%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA4A_HUMAN (Tubulin alpha-4A chain OS=Homo sapiens GN=TUBA4A PE=1 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 3.243e-102 Identity = 174/225 (77.33%), Postives = 195/225 (86.67%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427
BLAST of EY664923 vs. ExPASy Swiss-Prot
Match: TBA4A_BOVIN (Tubulin alpha-4A chain OS=Bos taurus GN=TUBA4A PE=1 SV=2) HSP 1 Score: 371.703 bits (953), Expect = 3.243e-102 Identity = 174/225 (77.33%), Postives = 195/225 (86.67%), Query Frame = 2 Query: 17 LLDNEAIHDICRRSLDIERPTYTNLNRXXXXXXXXXXXXXRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKMTVQFVDWCPTGFKCGINYQPPTVVPGGDLANVHRAVCMISNNTAVAEVFSRIDHIFDLMYAKMAFVHWYVGECMXECEFSESREDLAA 691 ++DNEAI+DICRR+LDIERPTYTNLNR RFDGA+NVD+TEFQTNLVPYPRIHF L++YAPVISAEKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACCL+YRGDVVPKDVNAA+A IKTK ++QFVDWCPTGFK GINYQPPTVVPGGDLA V RAVCM+SN TA+AE ++R+DH FDLMYAK AFVHWYVGE M E EFSE+RED+AA Sbjct: 203 MVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAA 427 The following BLAST results are available for this feature:
BLAST of EY664923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664923 ID=EY664923; Name=EY664923; organism=Citrus sinensis; type=EST; length=919bpback to top |