EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_USTMA (ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis GN=RRP3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13 Identity = 44/115 (38.26%), Postives = 62/115 (53.91%), Query Frame = 3 Query: 48 DSVATKANGEAAKKGYVGIHSSG----FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 D + A+ E +K I G F D + P+++ A + GF+HP+ +Q + IP+A+ DVI A++G GKTA F + LQ NP A VL TRELAYQI + E Sbjct: 79 DKDSPAADEEQDEKKVATIADDGKKVEFSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQVE 193
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13 Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LKP ++R I G+E PS +Q I G DV+ QA+SG GKTA F +S LQ+ + N AL+L TRELA QI Sbjct: 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_LODEL (ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus GN=TIF1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13 Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LKP ++R I G+E PS +Q I G DV+ QA+SG GKTA F +S LQ+ + N AL+L TRELA QI Sbjct: 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13 Identity = 40/78 (51.28%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ ELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ + N AL+L TRELA QI Sbjct: 32 LRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13 Identity = 40/78 (51.28%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ ELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ + N AL+L TRELA QI Sbjct: 32 LRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DEAD_HAEIN (Cold-shock DEAD box protein A homolog OS=Haemophilus influenzae GN=deaD PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.760e-13 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D L +L+A+ D GFE PS +Q CIP + G DV+ A++G GKTA F L L Q +P+ LV+ TRELA Q+ E F Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELF 96
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DEAD_SHIFL (Cold-shock DEAD box protein A OS=Shigella flexneri GN=deaD PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.605e-13 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ F Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDF 97
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DEAD_ECOLI (Cold-shock DEAD box protein A OS=Escherichia coli (strain K12) GN=deaD PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.605e-13 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ F Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDF 97
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DEAD_ECOL6 (Cold-shock DEAD box protein A OS=Escherichia coli O6 GN=deaD PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.605e-13 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ F Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDF 97
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DEAD_ECO57 (Cold-shock DEAD box protein A OS=Escherichia coli O157:H7 GN=deaD PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.605e-13 Identity = 40/90 (44.44%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ F Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDF 97 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |