EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_PICGU (ATP-dependent RNA helicase eIF4A OS=Pichia guilliermondii GN=TIF1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.708e-13 Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LKP ++R I G+E PS +Q I G DV+ QA+SG GKTA F +S LQ+ + N AL+L TRELA QI Sbjct: 24 FDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENLKATQALILAPTRELALQI 106
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.708e-13 Identity = 43/81 (53.09%), Postives = 47/81 (58.02%), Query Frame = 3 Query: 123 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 D L LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E + ALVL TRELA QI Sbjct: 36 DMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQI 116
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.708e-13 Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 3 Query: 108 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 S F LK +LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ + + ALVL TRELA QI Sbjct: 22 SPTFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_PICGU (ATP-dependent RNA helicase FAL1 OS=Pichia guilliermondii GN=FAL1 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.708e-13 Identity = 41/83 (49.40%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F LKPELL+ I + GFE PS +Q I Q I G D I QA+SG GKTA F + L + ALVL TRELA QI Sbjct: 26 FESMNLKPELLKGIYNYGFEAPSAIQSRAIMQIIRGRDTIAQAQSGTGKTATFSIGILSSIDTKSKDCQALVLSPTRELAQQI 108
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_LODEL (ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus GN=FAL1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.708e-13 Identity = 43/90 (47.78%), Postives = 52/90 (57.78%), Query Frame = 3 Query: 96 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 V +H + F LKPELL+ I GFE PS +Q I Q I G D I QA+SG GKTA F + L+ + + ALVL TRELA QI Sbjct: 22 VKVHRT-FESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQI 110
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DEAD_KLEPN (Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 4.708e-13 Identity = 39/90 (43.33%), Postives = 49/90 (54.44%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L L +P LVL TRELA Q+ F Sbjct: 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEF 97
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.149e-13 Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LKP ++R I G+E PS +Q I G DV+ QA+SG GKTA F +S LQ+ N AL+L TRELA QI Sbjct: 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRINENEKATQALILAPTRELALQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_CANGA (ATP-dependent RNA helicase FAL1 OS=Candida glabrata GN=FAL1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.149e-13 Identity = 43/86 (50.00%), Postives = 49/86 (56.98%), Query Frame = 3 Query: 108 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 S+ F LK LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ + + ALVL TRELA QI Sbjct: 22 SATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGMLQAIDLKKHDLQALVLSPTRELAAQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DBP9_NEUCR (ATP-dependent RNA helicase dbp-9 OS=Neurospora crassa GN=dbp-9 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.149e-13 Identity = 41/96 (42.71%), Postives = 57/96 (59.38%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL------QQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D L P L++A+ FE P+ VQ + IP A+ G DV+C+AK+G GKTA +VL L + T+P P +AL+L TRELA Q+ + F Sbjct: 97 FSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVLSGILKRKATDPTP-FTSALILVPTRELADQVHKAIDAF 191
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.031e-13 Identity = 42/86 (48.84%), Postives = 49/86 (56.98%), Query Frame = 3 Query: 108 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 S F L+ LLR I GFE PS +Q I Q I G DVI QA+SG GKTA F + LQ + + + ALVL TRELA QI Sbjct: 22 SPTFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQI 107 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |