EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_HUMAN (Eukaryotic initiation factor 4A-III OS=Homo sapiens GN=EIF4A3 PE=1 SV=4) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQI 122
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_CHICK (Eukaryotic initiation factor 4A-III OS=Gallus gallus GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 46 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQI 123
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_BOVIN (Eukaryotic initiation factor 4A-III OS=Bos taurus GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQI 122
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_SCLS1 (ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 42/83 (50.60%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F+D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 27 FQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_SCHPO (ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe GN=tif412 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 111 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 S F + LK +LLR I G+E PS VQ I Q G DVI QA+SG GKTA F + LQ + + AL+L TRELA QI Sbjct: 21 SSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQI 105
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_COCIM (ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis GN=FAL1 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 42/83 (50.60%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I GFE PS +Q I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 27 FDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_BOTFB (ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) GN=fal1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 42/83 (50.60%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F+D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 27 FQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DDX6_XENTR (Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis GN=ddx6 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 45 PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 P + K + + KG + F D+ LK ELL I + G+E PS +Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+ Sbjct: 79 PKDLRIKTSDVTSTKG------NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQV 179
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DDX6_XENLA (ATP-dependent RNA helicase ddx6 OS=Xenopus laevis GN=ddx6 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.337e-12 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 45 PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 P + K + + KG + F D+ LK ELL I + G+E PS +Q E IP A+ G D++ +AK+G GK+ +++ L++ + + A+V+ TRELA Q+ Sbjct: 79 PKDLRIKTSDVTSTKG------NEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQV 179
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: MAK5_SCHPO (ATP-dependent RNA helicase mak5 OS=Schizosaccharomyces pombe GN=mak5 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.052e-12 Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 3 Query: 99 GIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPN--PGQVTALVLCHTRELAYQICHEFE 380 G+ S + F L PE+L ++ +GF P +Q IP+A +G D+I +A +G GKT F + L+ N V ALV+ TRELA+QIC FE Sbjct: 118 GVDVSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKYVQALVVAPTRELAHQICQHFE 213 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |