EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_MOUSE (Eukaryotic initiation factor 4A-III OS=Mus musculus GN=Eif4a3 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 3.052e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELAVQI 122
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_EMENI (ATP-dependent RNA helicase fal1 OS=Emericella nidulans GN=fal1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.052e-12 Identity = 42/83 (50.60%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_ASPCL (ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus GN=fal1 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.052e-12 Identity = 42/83 (50.60%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTAVRETQALVLSPTRELATQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_COCIM (ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis GN=RRP3 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 108 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 + F+D + L A G++ P+++Q E IP A+ G D+I A++G GKTA F L LQ P + LVL TRELAYQI +FE Sbjct: 47 TKSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPQSMFGLVLAPTRELAYQISQQFE 137
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 111 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 362 + F D +K ++LR + + GFE PS +Q + + G DVI QA+SG GKT++ LS Q + + +V AL+L TRELA Q Sbjct: 35 TSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQ 118
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 49 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQI 126
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_SALSA (Eukaryotic initiation factor 4A-III OS=Salmo salar GN=eif4a3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 40 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQI 117
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 40 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQI 117
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 39/78 (50.00%), Postives = 48/78 (61.54%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L TRELA QI Sbjct: 49 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQI 126
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_YARLI (ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica GN=FAL1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.986e-12 Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F LK +LLR I GFE PS +Q I Q I G D I QA+SG GKTA F +S L+ + + A+VL TRELA QI Sbjct: 26 FESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQI 108 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |