EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.799e-12 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q + I Q I G DVI Q++SG GKTA F +S LQ + + AL+L T+ELA QI Sbjct: 48 LREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQIRETQALILAPTKELARQI 125
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_GIBZE (ATP-dependent RNA helicase FAL1 OS=Gibberella zeae GN=FAL1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.799e-12 Identity = 43/90 (47.78%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 96 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 23 VTVHPT-FESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQI 111
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_ASPOR (ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae GN=fal1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.799e-12 Identity = 42/83 (50.60%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 26 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQI 108
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_ASPNC (ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=fal1 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.799e-12 Identity = 42/83 (50.60%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 27 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQI 109
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DRS1_SCHPO (ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe GN=drs1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.799e-12 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 66 ANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQV---TALVLCHTRELAYQICH 371 A G+ K HSS F+ L +L+ + + GFE P+++Q + IP A+LG D++ A +G GKTA F++ L++ P +V L+LC TRELA Q CH Sbjct: 245 AEGDKEKSMMTTTHSS-FQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQ-CH 347
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DEAD_MYCTU (Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis GN=deaD PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.799e-12 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F D + P +LRAI D G+E P+ +Q IP + G DV+ A++G GKTA F + L + + ALVL TRELA Q+ F R+ Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRY 104
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_EMENI (ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12 Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 48 DSVATK--ANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 +SV+++ A E G + F++ + +L A + G++ P+ +Q + IP A+ G DVI A++G GKTA F L LQ P + LVL TRELAYQI FE Sbjct: 23 ESVSSRGSAKDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALMEAPQTLFGLVLAPTRELAYQISQAFE 135
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A3_MACFA (Eukaryotic initiation factor 4A-III OS=Macaca fascicularis GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12 Identity = 38/78 (48.72%), Postives = 47/78 (60.26%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 L+ +LLR I GFE PS +Q I Q I G DVI Q++SG GKTA F +S LQ + + AL+L RELA QI Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELAVQI 122
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12 Identity = 40/78 (51.28%), Postives = 46/78 (58.97%), Query Frame = 3 Query: 132 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 LK +LLR I FE PS +Q I I G DVI QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 31 LKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQI 108
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12 Identity = 43/90 (47.78%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 96 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 22 VTVHPT-FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQI 110 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |