EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.879e-12 Identity = 43/90 (47.78%), Postives = 50/90 (55.56%), Query Frame = 3 Query: 96 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 V +H + F LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F +S LQ + + ALVL TRELA QI Sbjct: 23 VTVHPT-FESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQI 111
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: SRMB_HAEIN (ATP-dependent RNA helicase srmB homolog OS=Haemophilus influenzae GN=srmB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 40/94 (42.55%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 111 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ----TEPNPGQVTALVLCHTRELAYQICHEFE 380 S F F L PELL+A+ G+ P+ +Q E IP A+ DV+ A +G GKTA F+L LQ PG LVL TRELA Q+ + E Sbjct: 4 SQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAE 97
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_SCLS1 (ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 3 Query: 108 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 + F+D + L A G++ P+ +Q E IP A+ G D+I A++G GKTA F L LQ P + LVL TRELAYQI FE Sbjct: 55 TKSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQSLLDKPQPLFGLVLAPTRELAYQISQSFE 145
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_DEBHA (ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii GN=RRP3 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 39/88 (44.32%), Postives = 48/88 (54.55%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 F + L PELL AI F P+ +Q E IP A+ G D+I A++G GKTA F + LQ LVL TRELAYQI F+ Sbjct: 67 FNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQALWEAQAAYYGLVLAPTRELAYQIKETFD 154
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_BOTFB (ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 F+D + L A G++ P+ +Q E IP A+ G D+I A++G GKTA F L LQ P + LVL TRELAYQI +FE Sbjct: 62 FKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQALLDKPQPLFGLVLAPTRELAYQISQQFE 149
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_DEBHA (ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii GN=FAL1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 96 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 + +H++ F LK +LL+ I GFE PS +Q I Q I G D I QA+SG GKTA F + L+ + AL+L TRELA QI Sbjct: 22 IKVHAT-FESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGMLEVIDTKSKDCQALILSPTRELAQQI 110
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: FAL1_ASPFU (ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus GN=fal1 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 41/83 (49.40%), Postives = 46/83 (55.42%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK LLR I G+E PS VQ I Q G D I QA+SG GKTA F + LQ + + ALVL TRELA QI Sbjct: 26 FEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQVIDTVVRETQALVLSPTRELATQI 108
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: EXP9_STRR6 (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=exp9 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F + L +LL I +GF S +Q + IP A+ G DVI QA++G GKTA F L TL++ + ALV+ TRELA Q E RF Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRF 92
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: EXP9_STRPN (Probable ATP-dependent RNA helicase exp9 OS=Streptococcus pneumoniae GN=exp9 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.160e-11 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 F + L +LL I +GF S +Q + IP A+ G DVI QA++G GKTA F L TL++ + ALV+ TRELA Q E RF Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRF 92
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_ASPOR (ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae GN=rrp3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.515e-11 Identity = 38/88 (43.18%), Postives = 49/88 (55.68%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 F++ L +L A G++ P+ +Q E IP A+ G D+I A++G GKTA F L LQ P LVL TRELAYQI FE Sbjct: 54 FKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQALMDKPSSFFGLVLAPTRELAYQISQAFE 141 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |