EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: CSHA_BACCR (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHE 374 FR+ L LL+++ GFE + +Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+ E Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEE 89
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: CSHA_BACC1 (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 10987) GN=cshA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHE 374 FR+ L LL+++ GFE + +Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+ E Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEE 89
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: CSHA_BACAN (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus anthracis GN=cshA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHE 374 FR+ L LL+++ GFE + +Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+ E Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEE 89
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: CSHA_BACAH (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis (strain Al Hakam) GN=cshA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.978e-11 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHE 374 FR+ L LL+++ GFE + +Q E IP A+ G D+I QA++G GKTA F L L + + + V +V+ TRELA Q+ E Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEE 89
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_PICST (ATP-dependent rRNA helicase RRP3 OS=Pichia stipitis GN=RRP3 PE=3 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11 Identity = 39/90 (43.33%), Postives = 48/90 (53.33%), Query Frame = 3 Query: 111 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 S F + L PELL AI F P+ +Q E IP A+ G D+I A++G GKTA F + LQ LVL RELAYQI F+ Sbjct: 71 STFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQTPYFGLVLAPARELAYQIKETFD 160
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_ASPNC (ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.583e-11 Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 3 Query: 108 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 S F++ + +L A G++ P+ +Q E IP A+ G D+I A++G GKTA F L LQ P LVL TRELAYQI FE Sbjct: 47 SKTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPILQALMEKPQPFFGLVLAPTRELAYQISKSFE 137
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RH26_ORYSJ (DEAD-box ATP-dependent RNA helicase 26 OS=Oryza sativa subsp. japonica GN=Os01g0618500 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 3 Query: 90 GYVGIHSSG--FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ--QTEPNPGQVTALVLCHTRELAYQICHE 374 G VG H S F + P L+AI D+G+E ++VQ +P + G DV+ +AK+G GKT F+L ++ T P + LV+C TRELA Q+ E Sbjct: 65 GVVGSHLSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSINLLVICPTRELANQVAAE 163
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 38/83 (45.78%), Postives = 45/83 (54.22%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK ELLR I GF PS +Q I I G DV+ QA+SG GKT F ++ LQ + L+L TRELA QI Sbjct: 24 FDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQNIDEKIKAPQGLILAPTRELALQI 106
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A1_ARATH (Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana GN=TIF4A-1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 44/91 (48.35%), Postives = 51/91 (56.04%), Query Frame = 3 Query: 93 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 Y +H S F L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ + + Q ALVL TRELA QI Sbjct: 34 YDDVHES-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQI 123
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: CGH1_CAEEL (ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans GN=cgh-1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.407e-11 Identity = 34/92 (36.96%), Postives = 53/92 (57.61%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAY---QICHEFER 383 F DF L +LL I + G+E PS +Q I A+ G D++ +AK+G GKT + + +++ +P + A+V+ TRELA QIC E + Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSK 136 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |