EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D L LLR + GFE PS +Q I I G DV+ QA+SG GKT F ++ LQ+ + + AL+L TRELA QI Sbjct: 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQI 106
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D L LLR + GFE PS +Q I I G DV+ QA+SG GKT F ++ LQ+ + + AL+L TRELA QI Sbjct: 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQI 106
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D L +LLR + GF PS +Q I I G DV+ QA+SG GKT F ++ LQ+ +P AL+L TRELA QI Sbjct: 25 FDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DBP9_EMENI (ATP-dependent RNA helicase dbp9 OS=Emericella nidulans GN=dbp9 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 43/114 (37.72%), Postives = 59/114 (51.75%), Query Frame = 3 Query: 42 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ------QTEPNPGQVTALVLCHTRELAYQI 365 A D +T+AN KG F L P L +A+V F P+ VQ + IP A+ G D++ +AK+G GKTA +VL LQ +P+ T L+L TRELA Q+ Sbjct: 7 ANDVPSTEANEAEEVKG--ADRDEDFETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKAIDPSMKATTGLILVPTRELAEQV 118
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DBP9_AJECN (ATP-dependent RNA helicase DBP9 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=DBP9 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 102 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL----STLQQTEPNPG--QVTALVLCHTRELAYQI 365 I + F L P LL+A+ F P+ +Q E IP A+ G DV+ +AK+G GKTA ++L S LQQ P ++AL+L TRELA Q+ Sbjct: 21 ITAHSFETLKLDPRLLQALTQQKFTKPTPIQAEAIPLALDGKDVLARAKTGSGKTAAYLLPVLQSILQQKRNTPAHKSISALILVPTRELAEQV 114
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_NEOFI (ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 F+D + +L A G++ P+ +Q E IP A+ G D+I A++G GKTA F L LQ P L+L TRELA+QI FE Sbjct: 54 FKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQALMEKPQSFFGLILAPTRELAFQISKSFE 141
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RH28_ARATH (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana GN=RH28 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 39/93 (41.94%), Postives = 52/93 (55.91%), Query Frame = 3 Query: 96 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA---LVLCHTRELAYQI 365 V H+ F + L LLRA G++ P+ +Q CIP A+ G D+ A +G GKTA F L TL++ P +V A L+L TRELA QI Sbjct: 162 VSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQI 254
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RH25_ORYSJ (DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp. japonica GN=Os01g0618400 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 37/123 (30.08%), Postives = 63/123 (51.22%), Query Frame = 3 Query: 39 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPG--------QVTALVLCHTRELAYQICHEFER 383 +AP+ A K+ E+ + + F + P L+A+ D+G+E ++VQ +P + G DV+ +AK+G GKT F+L ++ P + LV+C TRELA Q+ E ++ Sbjct: 102 EAPEFDAAKSGDESGGVDGSYLSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKK 224
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 F D LK ELL+ + GFE PS +Q I + DV+ QA+SG GKT F ++ LQ+ + + AL+L TRELA QI Sbjct: 25 FDDMNLKDELLKGVYGYGFEEPSAIQQRAILPIVEEHDVLAQAQSGTGKTGTFSIAALQRIDSSIKAPQALILAPTRELALQI 107
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.517e-11 Identity = 42/106 (39.62%), Postives = 54/106 (50.94%), Query Frame = 3 Query: 48 DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 DS+ N E +H F + LK LLR I GF PS +Q I I G DV+ QA+SG GKT F ++ LQ+ + + AL+L TRELA QI Sbjct: 3 DSITNPENSEIQTNYDKIVHK--FDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDESIKAPQALILAPTRELALQI 106 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |