EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RRP3_PHANO (ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum GN=RRP3 PE=3 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 39/113 (34.51%), Postives = 61/113 (53.98%), Query Frame = 3 Query: 48 DSVATKANGEAAKKGYVGIHS--SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFE 380 D+ A +++ EA + + + F D ++ EL A + G++ + +Q E IP A+ G D+I A++G GKTA FVL LQ P L++ TRELAYQI + + Sbjct: 92 DAEAEQSDEEAEAQAAAAVEAPKKTFADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLPILQALLDKPQAYFGLIMAPTRELAYQISQQVD 204
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RH38_ORYSJ (DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica GN=Os03g0158200 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 3 Query: 90 GYVGIHSSGFRDFLLKPELLRAIVDS-GFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 362 G V ++ F D L PELL+ + D GF PS++Q +P + D+I QA +G GKT FVL L + +PN A+ +C TRELA Q Sbjct: 93 GTVYESAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQ 186
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: RH36_ORYSJ (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica GN=Os07g0633500 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = 3 Query: 39 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEF 377 +AP + T+ G+ A V S F + L L+ G P+ VQ CIP+A+ G DV+ A++G GKTA F L L + +P V AL L TRELA Q+ +F Sbjct: 56 EAPAAAVTEHAGDDAAAAAV---PSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQF 165
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 45/100 (45.00%), Postives = 54/100 (54.00%), Query Frame = 3 Query: 66 ANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 A+G+ Y ++ S F L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ + Q ALVL TRELA QI Sbjct: 26 ADGKDFFTSYDEVYDS-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQI 124
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: IF4A2_ARATH (Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana GN=TIF4A-2 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 44/91 (48.35%), Postives = 50/91 (54.95%), Query Frame = 3 Query: 93 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQI 365 Y +H S F L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ + Q ALVL TRELA QI Sbjct: 34 YDEVHES-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQI 123
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DRS1_DEBHA (ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii GN=DRS1 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 36/112 (32.14%), Postives = 62/112 (55.36%), Query Frame = 3 Query: 42 APDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTA---LVLCHTRELAYQIC 368 A D A+ E A +H++ F+ L +L+ + G+ PS +Q CIP A+LG D++ A +G GKTA +++ +++ P ++++ +VL TRELA Q+C Sbjct: 236 AEDMAEFYADEEEATTAKKQLHTT-FQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPIIERLLYKPAKISSTRVIVLAPTRELAIQVC 346
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DBP9_ASPCL (ATP-dependent RNA helicase dbp9 OS=Aspergillus clavatus GN=dbp9 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.817e-11 Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 3 Query: 57 ATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ------QTEPNPGQVTALVLCHTRELAYQICHEFERF 386 A A G+ AK ++ F + L P L +A++ F P+ VQ + IP A+ G D++ +AK+G GKTA +VL LQ +P+ T L+L TRELA Q+ +F Sbjct: 13 AEVAEGKEAKDA----DNTDFENLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKAADPSLKATTGLILVPTRELAEQVQSVITKF 124 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |