EG358373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: SUB2_ASHGO (ATP-dependent RNA helicase SUB2 OS=Ashbya gossypii GN=SUB2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.741e-37 Identity = 82/126 (65.08%), Postives = 98/126 (77.78%), Query Frame = 3 Query: 39 QAPDSVATKA--NGEAA-------KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 Q ++ AT+ NGE A KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V+ +VLC+ RELAYQI +E+ RF Sbjct: 20 QVDNTKATEVAGNGEEAADGKDGDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSVVVLCNARELAYQIRNEYLRF 145
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: SUB2_ASPTN (ATP-dependent RNA helicase sub2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sub2 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.580e-37 Identity = 80/118 (67.80%), Postives = 91/118 (77.12%), Query Frame = 3 Query: 36 AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 A A T G + KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEV CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP PG+ + LV+CHTRELAYQI +E+ RF Sbjct: 32 APAKTGDLTVTGGRSDKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEV---CIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARF 146
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: SUB2_PHANO (ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum GN=SUB2 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.676e-37 Identity = 81/113 (71.68%), Postives = 92/113 (81.42%), Query Frame = 3 Query: 57 ATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTE--PNPGQVTALVLCHTRELAYQICHEFERF 386 A A+GE KKG YVGIHS+GFRDFLLK EL+RAI D GFEHPSEVQ IPQAILG DV+CQAKSG+GKTAVFVL+TLQQ + P PG + LV+CHTRELAYQI +E+ RF Sbjct: 35 APDASGE--KKGSYVGIHSTGFRDFLLKDELVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDEKPEPGVASILVMCHTRELAYQIRNEYNRF 145
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: SUB2_YEAST (ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae GN=SUB2 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.360e-36 Identity = 74/102 (72.55%), Postives = 87/102 (85.29%), Query Frame = 3 Query: 84 KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI +E+ RF Sbjct: 52 KKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRF 153
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: SUB2_YEAS7 (ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae (strain YJM789) GN=SUB2 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.360e-36 Identity = 74/102 (72.55%), Postives = 87/102 (85.29%), Query Frame = 3 Query: 84 KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P PG+V +V+C+ RELAYQI +E+ RF Sbjct: 52 KKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRF 153
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: SUB2_KLULA (ATP-dependent RNA helicase SUB2 OS=Kluyveromyces lactis GN=SUB2 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.360e-36 Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 3 Query: 48 DSVATKANGE---------AAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERF 386 D+ AT+ N E + KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +P G+V+ +VLC+ RELAYQI +E+ RF Sbjct: 22 DNKATEVNAEGNGESQAKDSDKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVQGEVSVVVLCNARELAYQIRNEYLRF 144
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DHH1_YARLI (ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica GN=DHH1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.279e-18 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 3 Query: 111 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 362 +GF DF LK ELL I ++GFE+PS +Q E IP A+ G D++ +AK+G GKTA FV+ LQQ P ++ AL++ TRELA Q Sbjct: 28 TGFEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPALQQVNPKVNKIQALIMVPTRELALQ 111
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.414e-17 Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 362 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQ 129
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.414e-17 Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 362 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQ 129
BLAST of EG358373 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.414e-17 Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 117 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQ 362 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ +P ++ AL++ TRELA Q Sbjct: 38 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQ 119 The following BLAST results are available for this feature:
BLAST of EG358373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
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Sequences
The
following sequences are available for this feature:
EST sequence >EG358373 ID=EG358373; Name=EG358373; organism=Citrus sinensis; type=EST; length=388bpback to top |