CX671758

Overview
NameCX671758
Unique NameCX671758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length746
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2179 contig Csv1_Contig2179:107..852. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_PORYE (Photosystem I reaction center subunit XI OS=Porphyra yezoensis GN=psaL PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.180e-29
Identity = 67/156 (42.95%), Postives = 96/156 (61.54%), Query Frame = -3
Query:  130 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLP 597
            + I+P N DPF+G+L TP+++S        NLPAYR  +SPLLRG+E+G+AHG+ L+GPF K GPLR T++A  AG L++  L++IL+ CL++YG  SF+              R    D LQT++GW +FT       + G  +AY LL   N+P
Sbjct:    3 EFIKPYNDDPFVGNLSTPVSTSSFSKGTSRNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RADSKDPLQTSEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_TRIEI (Photosystem I reaction center subunit XI OS=Trichodesmium erythraeum (strain IMS101) GN=psaL PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.013e-29
Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = -3
Query:  148 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLL 591
            +QP  GDPF+G L TPI+ S     ++ NLP YR  +SP+LRG+EVG+AHG+ +VGP+ K GPLR++ +A   G ++   LV+I +ICL+ YG+ SF    P  A            D L+T++GW++FT       + G + A+FLL
Sbjct:   10 VQPYKGDPFVGHLSTPISDSDFTRAFIGNLPIYRPGLSPILRGLEVGMAHGYFIVGPWTKLGPLRDSAVANLGGLISTIALVLIATICLSAYGLVSFQGKSPEGA------------DPLKTSEGWSQFTGGFFIGAMGGAVVAFFLL 145          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_CYAP4 (Photosystem I reaction center subunit XI OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psaL PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 62/150 (41.33%), Postives = 91/150 (60.67%), Query Frame = -3
Query:  148 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLL 597
            ++I+P NGDPF G L TPI+ S     ++ NLPAYR  +SP+LRG+E+G+AHG+ L+GP+VK GPLR++++A   G ++   L++I + CL  YGI SF + E +  P             L TA+GW++FT         G   A+ LL
Sbjct:    8 ELIKPYNGDPFTGHLSTPISDSDFTRTFIGNLPAYRKGLSPILRGLEIGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILIATACLAAYGIVSFQKEEAAANP-------------LNTAEGWSQFTAGFFVGATGGAFVAFTLL 144          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_ODOSI (Photosystem I reaction center subunit XI OS=Odontella sinensis GN=psaL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.906e-28
Identity = 63/129 (48.84%), Postives = 88/129 (68.22%), Query Frame = -3
Query:  205 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKF 591
            I+P N DPF+G L TPITSS +    L NLPAYR  ++PLLRG+E+GLAHG+ L+GPFVK GPLRN++IA  +G L+   L++IL++ LTIYG+A+F +G+ +           +  + LQT   W +F
Sbjct:    5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLGPLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDLQTKKAWDQF 122          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_CYAME (Photosystem I reaction center subunit XI OS=Cyanidioschyzon merolae GN=psaL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.906e-28
Identity = 65/148 (43.92%), Postives = 87/148 (58.78%), Query Frame = -3
Query:  148 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLL 591
            I+P N DPF+G L TPI SS L   YLS LP YR  VSP LRG+E+G+AHG+ L+GPFV+ GPLRNT+I   AG L+A  L+VIL++ + +YG  SF+                 +   L++ DGW +         + G  +AY LL
Sbjct:    5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDIKYLAGLLSAIGLIVILTLGMLLYGAVSFT----------------NDSQDLESVDGWRQLASGFLLGAVGGAGFAYLLL 136          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_SYNY3 (Photosystem I reaction center subunit XI OS=Synechocystis sp. (strain PCC 6803) GN=psaL PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.796e-28
Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = -3
Query:  133 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNL 597
            QV+Q  NGDPF+G L TPI+ S     ++ NLPAYR  +SP+LRG+EVG+AHG+ L+GP+   GPLR++E     G + A  L+++ +  L+ YG+ +F              G +   D LQTADGW++F       G+ G   AYFLL  L++
Sbjct:    6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPLRDSEYQYIGGLIGALALILVATAALSSYGLVTFQ-------------GEQGSGDTLQTADGWSQFAAGFFVGGMGGAFVAYFLLENLSV 147          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_SYNE7 (Photosystem I reaction center subunit XI OS=Synechococcus elongatus (strain PCC 7942) GN=psaL PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28
Identity = 71/162 (43.83%), Postives = 94/162 (58.02%), Query Frame = -3
Query:   91 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLPYFVK*KYVTSTLW 576
            G P IG+L TPI SSP    +++ LP YR  +S   RG+E+G+AHGFLL GPF   GPLRNTE AG AG LA   LVVIL++CL++YG A      PS A     T     P +L T +GW++FT      G+ G   A+F  Y+ + PY      + + +W
Sbjct:   10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNAG---SGPSAAESTVTT--PNPPQELFTKEGWSEFTSGFILGGLGG---AFFAFYLASTPYVQPLVKIAAGVW 163          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_MASLA (Photosystem I reaction center subunit XI OS=Mastigocladus laminosus GN=psaL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.474e-28
Identity = 72/174 (41.38%), Postives = 96/174 (55.17%), Query Frame = -3
Query:  133 SKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNL 654
            SK SP        S+    +V+ P   DP IG LETPI SSPL+ W++ NLPAYR  ++   RG+EVG+AHG+ + GPF K GPLRNT  A  AG L+A  L++IL+  LT+Y  +   +   S A           P+  Q+++GW  F       GI G + AYFL   L L
Sbjct:    8 SKNSP--------SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGYWIFGPFAKLGPLRNTVNANLAGLLSALGLIIILTGALTLYANSKPPKPVKSVA-------TPNPPEAFQSSEGWNNFASAFLIGGIGGAVVAYFLTSNLEL 166          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_ANASP (Photosystem I reaction center subunit XI OS=Anabaena sp. (strain PCC 7120) GN=psaL PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.474e-28
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = -3
Query:  151 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFL 627
            K + S+    +V+ P   DP  G+LETP+ +SPL+ W+++NLPAYR  ++P  RG+EVG+AHG+ L GPF K GPLR+   A  AG L A  LVV+ ++ L++Y     +   P TA  L        PD  Q+ +GW  F       GI G + AYFL
Sbjct:    9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSLY-----ANSNPPTA--LASVTVPNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160          
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_ANAVT (Photosystem I reaction center subunit XI OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaL PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 64/159 (40.25%), Postives = 92/159 (57.86%), Query Frame = -3
Query:  151 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFL 627
            K + S+    +V+ P   DP  G+LETP+ +SPL+ W+++NLPAYR  ++P  RG+EVG+AHG+ L GPF K GPLR+   A  AG L A  LVV+ ++ L++Y     +   P     +T+      PD  Q+ +GW  F       GI G + AYFL
Sbjct:    9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160          
The following BLAST results are available for this feature:
BLAST of CX671758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PSAL_PORYE1.180e-2942.95Photosystem I reaction center subunit XI OS=Porphy... [more]
PSAL_TRIEI2.013e-2941.89Photosystem I reaction center subunit XI OS=Tricho... [more]
PSAL_CYAP44.484e-2941.33Photosystem I reaction center subunit XI OS=Cyanot... [more]
PSAL_ODOSI2.906e-2848.84Photosystem I reaction center subunit XI OS=Odonte... [more]
PSAL_CYAME2.906e-2843.92Photosystem I reaction center subunit XI OS=Cyanid... [more]
PSAL_SYNY33.796e-2841.29Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_SYNE74.957e-2843.83Photosystem I reaction center subunit XI OS=Synech... [more]
PSAL_MASLA6.474e-2841.38Photosystem I reaction center subunit XI OS=Mastig... [more]
PSAL_ANASP6.474e-2841.51Photosystem I reaction center subunit XI OS=Anabae... [more]
PSAL_ANAVT1.104e-2740.25Photosystem I reaction center subunit XI OS=Anabae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A04-A7-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671758 ID=CX671758; Name=CX671758; organism=Citrus sinensis; type=EST; length=746bp
TTTTTTAACTGAAGCAAGTTTCATTTGCAATAAACATCCCAAACAGGTAG
ATTTACAGAGTAGCAAATTGAGATATATGGGATCTTAAAACCAAAGAGTA
GATGTTACATATTTCTATTTAACGAAGTAGGGAAGGTTAAGAACGTAAAG
CAGGAAATAAGCCCAAATGACACCAGAAATTCCACCAAAGAAGAATCCTC
AAGTGAACTTAGCCCACCCATCAGCTGTTTGCAACTGATCAGGCTCCTTC
TTCCTTCCGGTCAATGTTAAGCCTGGAGCAGTGGATGGCTCTCCTTCACT
GAATGAAGCAATTCCATAGATTGTCAAGCAAATGCTGAGGATCACAACAA
GGTCACCAGCTGCCAATGACCCTGCTGGTCCTGCTATTTCTGTGTTTCTC
AATGGCCCTGCCTTAACAAATGGACCCACAAGGAGGAATCCATGGGCCAA
CCCCACCTCTACTCCTCTCAGTAGTGGGCTGACTGCCGTCCGATAAGCTG
GTAGATTTGAGAGGTACCATGCAATCAATGGACTTGATGTAATTGGAGTC
TCCAAGCTTCCAATGAATGGATCACCATTGATTGGCTGAATAACTTGGTA
AGTTGGCTTTTCAGATTGGATAGCTTTGACAAGGAAACGAGGGCTTCTCT
TGGAGGGAACAACCCTGAATGGAGATCCAGAGATACCCCTTGGAGTAAGC
AGGCTCCTGGAAACTGGTGAAGTAAAGCTACTCTTGAGCTGGCTGG
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