CX671758
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1) HSP 1 Score: 325.865 bits (834), Expect = 1.465e-88 Identity = 160/209 (76.56%), Postives = 184/209 (88.04%), Query Frame = -3 Query: 118 SQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLPYFVK 744 SQL SSF S +R+L++P+G+S SP R +P+ R+ F ++AIQ++KPT+QVIQPINGDPFIGSLETP+TSSPLIAWYLSNLPAYRTAVSPLLRG+EVGLAHGF LVGPFVKAGPLRNT AG AGSLAAG L+VILS+CLT+YG+ASF+EGEPSTAP LTLTGRKK PD LQTADGWAKF+ GISGVIWAYFLLYVL+LPY+VK Sbjct: 10 SQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2) HSP 1 Score: 322.783 bits (826), Expect = 1.240e-87 Identity = 162/210 (77.14%), Postives = 181/210 (86.19%), Query Frame = -3 Query: 118 SQLKSSFTSP-VSRSLLTPRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLPYFVK 744 SQL+SSF+S +S+ L P+GISG+PF V P+KR F V+A++S+K T+QV+QPINGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGF LVGPFVKAGPLRNT AG AGSLAA LVVILS+CLTIYGI+SF EGEPS AP LTLTGRKK+PDQLQTADGWAKFT GISGV WAYFLLYVL+LPYFVK Sbjct: 10 SQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 2.859e-84 Identity = 158/210 (75.24%), Postives = 178/210 (84.76%), Query Frame = -3 Query: 118 SQLKSSFTSPVSRSLLTPRGISGSPFRVVPS-KRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLPYFVK 744 SQLKS FT+ ++L+ P+GISG R PS +R F V+AI++EKPTYQVIQP+NGDPFIG LETP+TSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHGFLLVGPFVKAGPLRNTE AG AGSLAA LVVILS+CLT+YGIASF EGEPS AP LTLTGRKK+PDQLQ+ADGWAKFT G+SGV WA FL+YVL+LPY+ K Sbjct: 10 SQLKSGFTT---KALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.386e-77 Identity = 139/192 (72.40%), Postives = 163/192 (84.90%), Query Frame = -3 Query: 118 PRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLPYFVK 693 PRG+SG+ R PRF+VKA++S+KPTYQV+QPINGDPFIGSLETP+TSSPL+AWYLSNLPAYRTAVSPLLRG+EVGLAHG+LLVGPF GPLRNT + G AG+L A LV ILS+CLT+YG+ASF+EGEPSTAP LTLTGRKKE D+LQTA+GW++FT G+SG +WAYFLLYVL+LPYF K Sbjct: 23 PRGMSGASLT-----RRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_GUITH (Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.945e-32 Identity = 69/150 (46.00%), Postives = 94/150 (62.67%), Query Frame = -3 Query: 148 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLL 597 Q ++P N DPF+G+L TPIT+S LSNLPAYR +SPLLRG+E+G+ HG+ LVGPF K GPLRN+E+A AG +A L++I++ CL IYG+ SF+ + +QLQ+A GW +FT I G +AY L+ Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------EQLQSAKGWRQFTSGWLVGSIGGASFAYILI 138
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31 Identity = 69/156 (44.23%), Postives = 97/156 (62.18%), Query Frame = -3 Query: 130 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLP 597 + I+P N DPF+G+L TP+++S L NLPAYR +SPLLRG+E+G+AHG+ L+GPF K GPLR T++A AG L++ L++IL+ CL++YG SF+ R D LQTA+GW +FT + G +AY LL N+P Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQTAEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_GRATL (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui GN=psaL PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31 Identity = 69/154 (44.81%), Postives = 97/154 (62.99%), Query Frame = -3 Query: 130 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLLYVLNLP 591 IQ N DPF+G+L TP+++S L+NLPAYR +SPLLRG+E+G+AHG+ LVGPF K GPLRNT++A +G L+A L++IL++CL++YG SF + + D LQT +GW +FT + G +AY LL N+P Sbjct: 5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_THEEB (Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.171e-31 Identity = 61/150 (40.67%), Postives = 97/150 (64.67%), Query Frame = -3 Query: 148 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLL 597 ++++P NGDPF+G L TPI+ S L+ ++ NLPAYR +SP+LRG+EVG+AHG+ L+GP+VK GPLR++++A G ++ L+++ + CL YG+ SF +G S+ D L+T++GW++FT + A+FLL Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_CYACA (Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.067e-30 Identity = 64/148 (43.24%), Postives = 92/148 (62.16%), Query Frame = -3 Query: 148 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLL 591 I+P +PF+G+L TP+ SS + WYL NLP YR +SPLLRG+E+G+AHG+ ++GPF K GPLRNT+++ +G +AA L++I SI + IYGI +F E + D+LQTA+GW + + G +AY LL Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQTANGWRQLASGFLLGAVGGAGFAYILL 138
BLAST of CX671758 vs. ExPASy Swiss-Prot
Match: PSAL_SYNEN (Photosystem I reaction center subunit XI OS=Synechococcus elongatus naegeli GN=psaL PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 5.296e-30 Identity = 60/150 (40.00%), Postives = 96/150 (64.00%), Query Frame = -3 Query: 148 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIAGPAGSLAAGDLVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKFTXXXXXXGISGVIWAYFLL 597 ++++P NGDPF+G L TPI+ S L+ ++ NLPAYR +SP+L G+EVG+AHG+ L+GP+VK GPLR++++A G ++ L+++ + CL YG+ SF +G S+ D L+T++GW++FT + A+FLL Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILPGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFLL 140 The following BLAST results are available for this feature:
BLAST of CX671758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671758 ID=CX671758; Name=CX671758; organism=Citrus sinensis; type=EST; length=746bpback to top |