CX671443

Overview
NameCX671443
Unique NameCX671443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_ECOLI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli (strain K12) GN=spoT PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43
Identity = 94/208 (45.19%), Postives = 144/208 (69.23%), Query Frame = -2
Query:   30 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 650
            L+E L   I +YL  ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD+E++ A LLHD +EDT   T++ +E+ FG +V  +VEG   VSKL KLK +++    ++ +A++ R+M +AM +++RVI++KLADR HNMRTL  + P K+  IA ETL++++PLA  LG++ IK+ELE L F       Y  +K  V
Sbjct:    3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVV 202          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_ECO57 (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43
Identity = 94/208 (45.19%), Postives = 144/208 (69.23%), Query Frame = -2
Query:   30 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 650
            L+E L   I +YL  ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD+E++ A LLHD +EDT   T++ +E+ FG +V  +VEG   VSKL KLK +++    ++ +A++ R+M +AM +++RVI++KLADR HNMRTL  + P K+  IA ETL++++PLA  LG++ IK+ELE L F       Y  +K  V
Sbjct:    3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVV 202          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STREQ (Putative GTP pyrophosphokinase OS=Streptococcus equisimilis GN=relA PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43
Identity = 91/205 (44.39%), Postives = 142/205 (69.27%), Query Frame = -2
Query:    6 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 620
            Y++  +   V++AL  A  AH  Q R+SGEP+I+HP++VA IL +L LD  ++A G LHD VEDT++ T + IE +FG  VR IV+G   V+KLGK++ K+    +    A++ R+M +AM++++RVI+VKLADRLHNMRTL H+   KQ  I+ ET++++APLA  LG+ +IK ELE+L+F Y N  ++ K+   + +  ++++
Sbjct:   19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRRERE 215          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAAM (GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=relA PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43
Identity = 100/213 (46.95%), Postives = 141/213 (66.20%), Query Frame = -2
Query:    6 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 644
            E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+ +  Y +   Y     R+ +L KKK+
Sbjct:   18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINTIKWELEDTALRYIDNVQYF----RIVNLMKKKR 218          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_VIBCH (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Vibrio cholerae GN=spoT PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.162e-41
Identity = 91/188 (48.40%), Postives = 135/188 (71.81%), Query Frame = -2
Query:   63 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSF--MYTN 620
            YL+  ++E +R++ ++A +AH+GQ R SGEP+IIHPV VARIL E+ LD E++ A LLHD +ED +V T E ++  FG++V  +V+G   VSKL KLK ++     ++ +A++ R+M LAM +++RVI++KLADR  NMRTL  + P K+  IA ETL+++APLA  LG++ IK+ELE L F  +Y N
Sbjct:   14 YLTEPQIEALRQSYVVARDAHEGQTRSSGEPYIIHPVAVARILAEMRLDLETLQAALLHDVIEDCDV-TKEDLDAHFGSSVAELVDG---VSKLDKLKFRDR----KEAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLAHRLGIHNIKTELEELGFEALYPN 193          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_HAEIN (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Haemophilus influenzae GN=spoT PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.162e-41
Identity = 91/183 (49.73%), Postives = 127/183 (69.40%), Query Frame = -2
Query:   30 MLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 578
            M+A +AH+GQ R SGEP+I HPV VA I+ +L LD E++ A LLHD +EDT   T E+++EEFGA+V  IV+G   VSKL KLK +      Q+ + ++ R+M LAMT ++RV+++KLADR HNMRTL  + P K+  IA ETL+++ PLA  LG+  IK+ELE+LSF   +   Y  +K+ V
Sbjct:    1 MIARDAHEGQFRSSGEPYITHPVAVASIIAQLHLDHEAVMAALLHDVIEDTPY-TEEQLKEEFGASVAEIVDG---VSKLDKLKFRTR----QEAQVENFRKMILAMTRDIRVVLIKLADRTHNMRTLGSLRPDKRRRIAKETLEIYCPLAHRLGIEHIKNELEDLSFQAMHPHRYEVLKKLV 175          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_SYNY3 (Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803) GN=spoT PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.589e-41
Identity = 92/191 (48.17%), Postives = 125/191 (65.45%), Query Frame = -2
Query:   24 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVAD 596
            L+ RA   A++ H  Q+R+SGEP+I HPV VA +L +L  D   IAAG LHD VEDT++ + E+IE  FG     +VEG TK+SK           S  + +A++ R+MFLAM +++RVI+VKLADRLHNMRTL  + P KQ  IA ET  +FAPLA  LG+++ K ELE+LSF Y   + Y K++  V +
Sbjct:   53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDI-SIEQIEALFGEETASLVEGVTKLSKFNF-------SSTTEHQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPDSYRKIQSLVVE 235          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_AQUAE (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex aeolicus GN=spoT PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.416e-41
Identity = 96/212 (45.28%), Postives = 140/212 (66.04%), Query Frame = -2
Query:   15 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYK 650
            L EDL   +S+  P   E ++RA   A E H  QKR++GEP+IIHP+ VA  L EL +D E+I A LLHDT+EDT+  T+E I+E FG  V ++VEG   V+K+GK+K K+E       +A++ R++ LA  E+ RVI++KL+DRL N++TL      K+  IA ET++++APLA  LG++ IK+ELE+ +F Y   E+Y KV+  V +  K
Sbjct:    9 LEEDLEKLLSHY-PQHAEEIQRAYEFAKEKHGEQKRKTGEPYIIHPLNVALKLAELGMDHETIIAALLHDTLEDTDT-TYEEIKERFGERVAKLVEG---VTKIGKIKYKSE-------QAENYRKLILATAEDPRVILLKLSDRLDNVKTLWVFREEKRKKIAKETMEIYAPLAHRLGVWSIKNELEDWAFKYLYPEEYEKVRNFVKESRK 208          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RSH_BRUO2 (GTP pyrophosphokinase rsh OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rsh PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.739e-40
Identity = 88/197 (44.67%), Postives = 132/197 (67.01%), Query Frame = -2
Query:    6 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 596
            L+ +A + A + H  QKR SG+P+  HP+EVA IL ++ LD  +IA  LLHDT+EDT   T + I++ FG  + ++VEG TK+ KL  +       S + V+A++LR++ LA++E+VRV++VKLADRLHNMRTL  M   K+  IA ET+ ++APLA  +GM  ++ ELE L+F Y N + +  V  R+A+L +K +
Sbjct:   22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA-TRQEIDQLFGPEIGKLVEGLTKLKKLDLV-------SKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTDRLAELLEKNR 210          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RSH_BRUAB (GTP pyrophosphokinase rsh OS=Brucella abortus GN=rsh PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.739e-40
Identity = 88/197 (44.67%), Postives = 132/197 (67.01%), Query Frame = -2
Query:    6 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 596
            L+ +A + A + H  QKR SG+P+  HP+EVA IL ++ LD  +IA  LLHDT+EDT   T + I++ FG  + ++VEG TK+ KL  +       S + V+A++LR++ LA++E+VRV++VKLADRLHNMRTL  M   K+  IA ET+ ++APLA  +GM  ++ ELE L+F Y N + +  V  R+A+L +K +
Sbjct:   22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA-TRQEIDQLFGPEIGKLVEGLTKLKKLDLV-------SKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTDRLAELLEKNR 210          
The following BLAST results are available for this feature:
BLAST of CX671443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
SPOT_ECOLI4.718e-4345.19Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
SPOT_ECO574.718e-4345.19Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
RELA_STREQ4.718e-4344.39Putative GTP pyrophosphokinase OS=Streptococcus eq... [more]
RELA_STAAM4.718e-4346.95GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
SPOT_VIBCH1.162e-4148.40Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
SPOT_HAEIN1.162e-4149.73Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
SPOT_SYNY32.589e-4148.17Probable guanosine-3',5'-bis(diphosphate) 3'-pyrop... [more]
SPOT_AQUAE4.416e-4145.28Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
RSH_BRUO23.739e-4044.67GTP pyrophosphokinase rsh OS=Brucella ovis (strain... [more]
RSH_BRUAB3.739e-4044.67GTP pyrophosphokinase rsh OS=Brucella abortus GN=r... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A12-B23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671443 ID=CX671443; Name=CX671443; organism=Citrus sinensis; type=EST; length=804bp
TTTTTTTTTTTTTTTTTATAGAGGTCTGCAACTCTTCTTTTGACCTTGGC
ATAATCTTCAGCATTTGTGTACATAAAGGATAGATTTTCAAGTTCAGACT
TAATTTGGTACATCCCTAACAATTTTGCCAAGGGAGCAAAGACCTGCAAT
GTCTCCGTTGCAATGCTGGACTGCTTATGTGGAGGCATGTGTGAAAGAGT
GCGCATGTTATGCAATCTATCAGCCAATTTGACTATGATAACACGGACCT
CCTCAGTCATGGCTAGAAACATTTGCCGTAGGTCATCAGCTTTAACATCT
TGCACTGAATGGTTTTCATTCTTACACTTTAATTTTCCCAGCTTTGATAC
CTTAGTCTCTCCCTCTACAATGCGGCGTACAGTAGCTCCAAACTCCTCCT
CTATTCTTTCAAAAGTAACAACATTTGTATCTTCAACTGTGTCATGTAGT
AATCCCGCAGCAATAGATTCCCAATCCAGTTCAAGTTCACCCAGAATACG
AGCAACTTCAACTGGATGAATGATGAAAGGCTCTCCACTCCGTCTTTTCT
GACCATCATGCGCCTCAAAAGCCAACATCAGAGCTCTACGGACCAATTCC
AATTCATTAGGTGAAAGGTATGATATGGTGGGCCTAAGATCCTCCCACAA
CCTTTCAGGAGAATCCTCTTTGAAGGCATCCGAAGAGACAGATGGAGACA
AACACAGCCGCCATCTTTTACAGGCAACATGAAGTAAACTTGACCTAGGG
AGTTTGCCAAGAAGAACAAGGTCAGAACCTTCAGTGCACCAACTTCCCAC
ATCA
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