CX671443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_MYXXA (GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.856e-48 Identity = 104/223 (46.64%), Postives = 155/223 (69.51%), Query Frame = -2 Query: 3 EDSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKKK 668 +DSPER PT+S P+ +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + + S ++ +A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++APLA LG+ IK+ELE+LSF Y +++ ++ A L K+KK+ Sbjct: 19 DDSPERH----PPTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKFSA----SASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQ---AKLNKRKKE 229
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_BACSU (GTP pyrophosphokinase OS=Bacillus subtilis GN=relA PE=3 SV=3) HSP 1 Score: 184.882 bits (468), Expect = 4.559e-46 Identity = 99/206 (48.06%), Postives = 144/206 (69.90%), Query Frame = -2 Query: 6 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 623 SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LHD VEDT+V T + ++E F V +V+G V+KLGK+K K++ ++ +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+ + Y N + Y R+ +L KKK+ Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYKSQ----EEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY----YRIVNLMKKKR 211
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAES (GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=relA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 96/206 (46.60%), Postives = 141/206 (68.45%), Query Frame = -2 Query: 6 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 623 SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y ++ Y R+ +L KKK+ Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYF----RIVNLMKKKR 211
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAEQ (GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=relA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 96/206 (46.60%), Postives = 141/206 (68.45%), Query Frame = -2 Query: 6 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 623 SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y ++ Y R+ +L KKK+ Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYF----RIVNLMKKKR 211
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAAW (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 100/213 (46.95%), Postives = 141/213 (66.20%), Query Frame = -2 Query: 6 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 644 E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y + Y R+ +L KKK+ Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYF----RIVNLMKKKR 218
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAAU (GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 100/213 (46.95%), Postives = 141/213 (66.20%), Query Frame = -2 Query: 6 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 644 E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y + Y R+ +L KKK+ Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYF----RIVNLMKKKR 218
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAAS (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476) GN=relA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 100/213 (46.95%), Postives = 141/213 (66.20%), Query Frame = -2 Query: 6 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 644 E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y + Y R+ +L KKK+ Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYF----RIVNLMKKKR 218
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAAR (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=relA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 100/213 (46.95%), Postives = 141/213 (66.20%), Query Frame = -2 Query: 6 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 644 E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y + Y R+ +L KKK+ Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYF----RIVNLMKKKR 218
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STAAN (GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315) GN=relA PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.613e-43 Identity = 100/213 (46.95%), Postives = 141/213 (66.20%), Query Frame = -2 Query: 6 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 644 E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y + Y R+ +L KKK+ Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYF----RIVNLMKKKR 218
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_SHIFL (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Shigella flexneri GN=spoT PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43 Identity = 94/208 (45.19%), Postives = 144/208 (69.23%), Query Frame = -2 Query: 30 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 650 L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++ +A++ R+M +AM +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG++ IK+ELE L F Y +K V Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVV 202 The following BLAST results are available for this feature:
BLAST of CX671443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671443 ID=CX671443; Name=CX671443; organism=Citrus sinensis; type=EST; length=804bpback to top |