CX671443

Overview
NameCX671443
Unique NameCX671443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RSH_BRUA2 (GTP pyrophosphokinase rsh OS=Brucella abortus (strain 2308) GN=rsh PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.739e-40
Identity = 88/197 (44.67%), Postives = 132/197 (67.01%), Query Frame = -2
Query:    6 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 596
            L+ +A + A + H  QKR SG+P+  HP+EVA IL ++ LD  +IA  LLHDT+EDT   T + I++ FG  + ++VEG TK+ KL  +       S + V+A++LR++ LA++E+VRV++VKLADRLHNMRTL  M   K+  IA ET+ ++APLA  +GM  ++ ELE L+F Y N + +  V  R+A+L +K +
Sbjct:   22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA-TRQEIDQLFGPEIGKLVEGLTKLKKLDLV-------SKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTDRLAELLEKNR 210          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RSH_BRUSU (GTP pyrophosphokinase rsh OS=Brucella suis GN=rsh PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.883e-40
Identity = 88/197 (44.67%), Postives = 132/197 (67.01%), Query Frame = -2
Query:    6 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 596
            L+ +A + A + H  QKR SG+P+  HP+EVA IL ++ LD  +IA  LLHDT+EDT   T + I++ FG  + ++VEG TK+ KL  +       S + V+A++LR++ LA++E+VRV++VKLADRLHNMRTL  M   K+  IA ET+ ++APLA  +GM  ++ ELE L+F Y N + +  V  R+A+L +K +
Sbjct:   22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA-TRQEIDQLFGPEIGKLVEGLTKLKKLDLV-------SKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMCEDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTDRLAELLEKNR 210          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RSH_BRUME (GTP pyrophosphokinase rsh OS=Brucella melitensis GN=rsh PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 4.883e-40
Identity = 88/197 (44.67%), Postives = 132/197 (67.01%), Query Frame = -2
Query:    6 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKK 596
            L+ +A + A + H  QKR SG+P+  HP+EVA IL ++ LD  +IA  LLHDT+EDT   T + I++ FG  + ++VEG TK+ KL  +       S + V+A++LR++ LA++E+VRV++VKLADRLHNMRTL  M   K+  IA ET+ ++APLA  +GM  ++ ELE L+F Y N + +  V  R+A+L +K +
Sbjct:   22 LLNKAYVYAMQKHRSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA-TRQEIDQLFGPEIGKLVEGLTKLKKLDLV-------SKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTDRLAELLEKNR 210          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_MYCLE (Probable GTP pyrophosphokinase OS=Mycobacterium leprae GN=relA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.969e-38
Identity = 88/194 (45.36%), Postives = 122/194 (62.89%), Query Frame = -2
Query:   27 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK--LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 602
            L +V+RA  +A + H  Q RRSG+P+I HP+ VA IL EL +D  ++ A LLHDTVEDT   T E + EEFG  V  +V+G TK+ +  LG              + + +R+M  AM  + RV+++K+ADRLHNMRT+  +PP KQ+  A ETL+V APLA  LGM  +K ELE+LSF   + + Y ++ R VA
Sbjct:   77 LSIVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDITTLVAALLHDTVEDTGY-TLEALSEEFGDEVGHLVDGVTKLDRVVLGSA-----------AEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEIVRLVA 258          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_BORBU (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Borrelia burgdorferi GN=spoT PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.330e-37
Identity = 81/207 (39.13%), Postives = 136/207 (65.70%), Query Frame = -2
Query:    3 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKKKK 623
            +Y    E + + +AL +A + H GQ R SGEP+IIHP+ V+  L + +LD+++  AGLLHD +EDTNV   E I +EF   +  +++G TK+  L      N+  S+++  A+ + +MF AMT ++R+II+KLAD+LHNM TLS++P ++Q  IA + L  + P+A+ LG+  +K+ LE+LSF +   +DY ++K  +++   +++K
Sbjct:   30 TYKDEFERKSIFKALEIAEQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLEDTNVEK-EEIVKEFDEEILSLIDGVTKIHDL-----HNKTRSIKE--ANTISKMFFAMTHDIRIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHLYPKDYKEIKNFLSETKIEREK 228          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_MYCTU (Probable GTP pyrophosphokinase OS=Mycobacterium tuberculosis GN=relA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.268e-37
Identity = 86/195 (44.10%), Postives = 123/195 (63.08%), Query Frame = -2
Query:   27 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK--LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 605
            +L +++RA  +A + H  Q R+SG+P+I HP+ VA IL EL +D  ++ A LLHDTVEDT   T E + EEFG  V  +V+G TK+ +  LG              + + +R+M  AM  + RV+++K+ADRLHNMRT+  +PP KQ+  A ETL+V APLA  LGM  +K ELE+LSF   + + Y ++ R VA
Sbjct:   79 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGY-TLEALTEEFGEEVGHLVDGVTKLDRVVLGSA-----------AEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEIVRLVA 261          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_MYCBO (Probable GTP pyrophosphokinase OS=Mycobacterium bovis GN=relA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.268e-37
Identity = 86/195 (44.10%), Postives = 123/195 (63.08%), Query Frame = -2
Query:   27 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSK--LGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVA 605
            +L +++RA  +A + H  Q R+SG+P+I HP+ VA IL EL +D  ++ A LLHDTVEDT   T E + EEFG  V  +V+G TK+ +  LG              + + +R+M  AM  + RV+++K+ADRLHNMRT+  +PP KQ+  A ETL+V APLA  LGM  +K ELE+LSF   + + Y ++ R VA
Sbjct:   79 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGY-TLEALTEEFGEEVGHLVDGVTKLDRVVLGSA-----------AEGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEIVRLVA 261          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_CORGL (GTP pyrophosphokinase OS=Corynebacterium glutamicum GN=relA PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 8.619e-37
Identity = 81/194 (41.75%), Postives = 125/194 (64.43%), Query Frame = -2
Query:   24 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVAD 605
            +++++ RA   A   HDG  R+SG+P+I HP+ VA I  E+ +D  ++ A LLHDTVEDT+  + + +  +FG  V R+V+G TK+ K+               +A+ +R+M +AM+++ RV+++K+ADRLHNMRT+  +PP KQ+  A +TL+V APLA  LGM  +K ELE+LSF     + Y ++ R VAD
Sbjct:   51 DVQVLERAYDTAERLHDGVIRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDY-SLDDLTRDFGEEVARLVDGVTKLDKVALGAA---------AEAETIRKMIVAMSQDPRVLVIKVADRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEIVRLVAD 234          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: RELA_STRCO (GTP pyrophosphokinase OS=Streptomyces coelicolor GN=relA PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.245e-35
Identity = 84/203 (41.38%), Postives = 125/203 (61.58%), Query Frame = -2
Query:    9 LSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKKK 617
            +  + L  + RA  +A   H GQKR+SG+P+I HP+ V  IL EL +D  ++ AGLLHDTVEDT     E +  +FG  V  +V+G TK+ K+            +  +A+ +R+M +AM ++ RV+++KLADRLHNMRT+ ++   KQ   A ETL+++APLA  LGM  IK ELE+L+F     + Y ++ R VA+   K+
Sbjct:  119 IETSTLRQIERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEY-GLEDLRRDFGDVVTLLVDGVTKLDKV---------KFGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEIVRLVAERAPKR 311          
BLAST of CX671443 vs. ExPASy Swiss-Prot
Match: SPOT_SPICI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Spiroplasma citri GN=spoT PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.376e-34
Identity = 78/187 (41.71%), Postives = 120/187 (64.17%), Query Frame = -2
Query:   42 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKV 602
            L+ +++A   A E H GQ R SG  +IIHP+     L +  +  +++ AGLLHD +EDT   TFE ++E FG  +  +VEG TKVS   K     EN +   +KA  LR+++L+M +++RVIIVKLADRLHN++T+ ++ P +Q  IA E+L++++ +A  LGM  +K E+E++SF   N   Y K+
Sbjct:   24 LKEIQKAYEYAEEKHHGQVRNSGARYIIHPLWTTFFLAQWRMGPKTLIAGLLHDVLEDTPA-TFEELQELFGIEIANLVEGVTKVSYFAK-----ENRT--QIKAQYLRKLYLSMAKDIRVIIVKLADRLHNLKTIGYLKPERQQIIARESLEIYSAIAHRLGMKAVKQEIEDISFKIINPVQYNKI 202          
The following BLAST results are available for this feature:
BLAST of CX671443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
RSH_BRUA23.739e-4044.67GTP pyrophosphokinase rsh OS=Brucella abortus (str... [more]
RSH_BRUSU4.883e-4044.67GTP pyrophosphokinase rsh OS=Brucella suis GN=rsh ... [more]
RSH_BRUME4.883e-4044.67GTP pyrophosphokinase rsh OS=Brucella melitensis G... [more]
RELA_MYCLE5.969e-3845.36Probable GTP pyrophosphokinase OS=Mycobacterium le... [more]
SPOT_BORBU1.330e-3739.13Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
RELA_MYCTU2.268e-3744.10Probable GTP pyrophosphokinase OS=Mycobacterium tu... [more]
RELA_MYCBO2.268e-3744.10Probable GTP pyrophosphokinase OS=Mycobacterium bo... [more]
RELA_CORGL8.619e-3741.75GTP pyrophosphokinase OS=Corynebacterium glutamicu... [more]
RELA_STRCO1.245e-3541.38GTP pyrophosphokinase OS=Streptomyces coelicolor G... [more]
SPOT_SPICI1.376e-3441.71Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A12-B23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671443 ID=CX671443; Name=CX671443; organism=Citrus sinensis; type=EST; length=804bp
TTTTTTTTTTTTTTTTTATAGAGGTCTGCAACTCTTCTTTTGACCTTGGC
ATAATCTTCAGCATTTGTGTACATAAAGGATAGATTTTCAAGTTCAGACT
TAATTTGGTACATCCCTAACAATTTTGCCAAGGGAGCAAAGACCTGCAAT
GTCTCCGTTGCAATGCTGGACTGCTTATGTGGAGGCATGTGTGAAAGAGT
GCGCATGTTATGCAATCTATCAGCCAATTTGACTATGATAACACGGACCT
CCTCAGTCATGGCTAGAAACATTTGCCGTAGGTCATCAGCTTTAACATCT
TGCACTGAATGGTTTTCATTCTTACACTTTAATTTTCCCAGCTTTGATAC
CTTAGTCTCTCCCTCTACAATGCGGCGTACAGTAGCTCCAAACTCCTCCT
CTATTCTTTCAAAAGTAACAACATTTGTATCTTCAACTGTGTCATGTAGT
AATCCCGCAGCAATAGATTCCCAATCCAGTTCAAGTTCACCCAGAATACG
AGCAACTTCAACTGGATGAATGATGAAAGGCTCTCCACTCCGTCTTTTCT
GACCATCATGCGCCTCAAAAGCCAACATCAGAGCTCTACGGACCAATTCC
AATTCATTAGGTGAAAGGTATGATATGGTGGGCCTAAGATCCTCCCACAA
CCTTTCAGGAGAATCCTCTTTGAAGGCATCCGAAGAGACAGATGGAGACA
AACACAGCCGCCATCTTTTACAGGCAACATGAAGTAAACTTGACCTAGGG
AGTTTGCCAAGAAGAACAAGGTCAGAACCTTCAGTGCACCAACTTCCCAC
ATCA
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