CV712801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.883e-50 Identity = 104/205 (50.73%), Postives = 134/205 (65.37%), Query Frame = -2 Query: 153 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 767 GSFDVT++A LPN VVMA +DEAEL HM TAA D P FRYPRG GIG++LP + LE+GKGRI+ G +VALL GT ++ A+ LE+ GL T+AD RF KPLD LI L K+HEV++T+EE SIGG G+HV+ + + +GL D +K R + LPD +I+ +P Q +AGLT HI TV L Q +E Sbjct: 434 GSFDVTYLATLPNFVVMAAADEAELVHMTYTAAEHDSGPIAFRYPRGGGIGIDLPETPE--KLEIGKGRIVKHGSKVALLSLGTRLEEAKRAADELEAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKALRQNSAGVE 636
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_CAUCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus GN=dxs PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.165e-49 Identity = 105/198 (53.03%), Postives = 131/198 (66.16%), Query Frame = -2 Query: 174 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 767 GSFD+ FM LP MV+MA +DE EL MVATAA IDDRPS FRYPRG G+G+++P + PLE+GKGRI+ EG VA++ +GT + L A+ LL + GL TV DARF KPLD L+ LA+ HE +ITVEEGS+GGFG+ V+Q LA G LD +K R L LPD + D P AQAGL I + +G Sbjct: 432 GSFDIGFMGALPGMVLMAAADEVELARMVATAAEIDDRPSAFRYPRGEGLGLDMPAIAE--PLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_CAUCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dxs PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.165e-49 Identity = 105/198 (53.03%), Postives = 131/198 (66.16%), Query Frame = -2 Query: 174 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 767 GSFD+ FM LP MV+MA +DE EL MVATAA IDDRPS FRYPRG G+G+++P + PLE+GKGRI+ EG VA++ +GT + L A+ LL + GL TV DARF KPLD L+ LA+ HE +ITVEEGS+GGFG+ V+Q LA G LD +K R L LPD + D P AQAGL I + +G Sbjct: 432 GSFDIGFMGALPGMVLMAAADEVELARMVATAAEIDDRPSAFRYPRGEGLGLDMPAIAE--PLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.570e-48 Identity = 100/192 (52.08%), Postives = 129/192 (67.19%), Query Frame = -2 Query: 192 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 767 G+FDV+ +A LPN VMA +DEAEL HMV TAAA D P RYPRG G GVE+P +G LE+GKGR++ EG VA+L +G + L A+ +LE+ G+ TVADARFC+PLD LI L + H LIT+E+G++GGFG+ V+ +LA G L+ R + LPD YIDHGSP + A AGLT + I T Sbjct: 435 GAFDVSMLANLPNFTVMAAADEAELCHMVVTAAAHDSGPIALRYPRGEGRGVEMP--ERGEVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDT 624
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.570e-48 Identity = 101/198 (51.01%), Postives = 129/198 (65.15%), Query Frame = -2 Query: 174 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILG 767 G+FD+ +++ LPNM VMA +DEAEL HM+ATAAA +D P RYPRG G GV LP ++G LE+GKGR++ +G VA+L +G ++ A+ LE+ GL +TVADARF KPLD LI L H LITVE+G++ GFG V+ LA G LDG R L LPDR+ID SPA+ A AGLT IA +G Sbjct: 433 GAFDIGYLSALPNMTVMACADEAELVHMMATAAAHNDGPIALRYPRGEGTGVALP--DQGDVLEIGKGRVIQDGHDVAILSFGAHLEEAKDAATALEARGLSVTVADARFAKPLDTTLIDDLMTKHSALITVEQGAVLGFGGLVLHHLAATGQLDGRCAVRTLHLPDRFIDQASPAEMYADAGLTADDIAQAALEAMG 628
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.869e-47 Identity = 104/207 (50.24%), Postives = 128/207 (61.84%), Query Frame = -2 Query: 153 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 767 GSFD+T++A LPNMVVMA +DEAEL HM TAA D P FRYPRGNG GV LP +P LE+GKGR++ EG+ VA+L GT + L A+ LE+ GL +V D RF KPLD LIR +HEV +TVEEGSIGG G+HV+ + +GL+D +K R L LPD + D P Q AGL I TV L +E Sbjct: 434 GSFDITYLATLPNMVVMAAADEAELVHMTYTAAEHDAGPIAFRYPRGNGTGVALP----AVPQKLEIGKGRVVREGKTVAILSLGTRLAEALKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLIDAGLKLRTLRLPDMFQDQDKPELQYDAAGLNAPQIVDTVLKALRHNSAGVE 636
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS1_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.529e-46 Identity = 100/207 (48.31%), Postives = 135/207 (65.22%), Query Frame = -2 Query: 147 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 767 GSFD+ FM LPNMVVMAPSDE EL +MV + A D P RYPRGNG+GV L G K I L +GKGR++ G++VA+L GT ++ L A+ L++ GL +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+ + +GL+D +K R L LPDR+ Q A+AGL I A V + L + + +E++ Sbjct: 434 GSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLE-GEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHRNSKPVEVV 638
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS2_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis GN=dxs2 PE=3 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.621e-45 Identity = 100/207 (48.31%), Postives = 134/207 (64.73%), Query Frame = -2 Query: 147 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 767 GSFD+ FM LPNMVVMAPSDE EL +MV + A D P RYPRGNG+GV L G K I L +GKGR++ G++VA+L GT ++ L A+ L++ GL +VAD RF KPLD AL R L KSH+V+IT+EEG++GGF + V+ + +GL+D +K R L LPDR+ Q A+AGL I A V L + + +E++ Sbjct: 434 GSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLE-GEKEI-LPIGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQRNSKPVEVV 638
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_CYAP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=dxs PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.313e-38 Identity = 88/204 (43.14%), Postives = 121/204 (59.31%), Query Frame = -2 Query: 162 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTRE 767 G +D+ ++ C+PN+V+MAP DEAEL M+ T D P RYPRGNG+GV L G + +P +GKG IL G+ + LLGYGT V + + + +L HG+ TV +ARF KPLD LI LAK ++T+EEG + GGFGS V + L +L V + +PD+ +DH P + A GLT S IA V +T+E Sbjct: 432 GMYDIAYLRCIPNLVIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGLGVPLMEEGWEALP--IGKGEILRNGDDLLLLGYGTMVNTAMQVAEILGEHGIEATVVNARFVKPLDTDLIVPLAKQTGKVVTLEEGCLMGGFGSAVAEALLDHNVL---VPVKRFGVPDQLVDHAKPDESFADLGLTSSQIADEVLKSFFKTQE 630
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.551e-38 Identity = 89/185 (48.11%), Postives = 121/185 (65.41%), Query Frame = -2 Query: 216 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 767 GSFD++++ C+PNM + APSDEAE + +++T D P RYPRG+G G LP + PL +GKG G R+A+L +GT V LA + L+ LTVAD RF +PLD ALIR LA +H++L+TVEE ++ GG GS V ++LA GL V R L LPDR++DHG+PA+ LA+ GL Sbjct: 433 GSFDLSYLRCVPNMTIAAPSDEAECWRLLSTGYH-HDGPFAVRYPRGSGPGAALPEADLD-PLAIGKGVCRRRGRRIAVLAFGTLVVPALAVAEALD-----LTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAGL---DVPVRHLGLPDRFVDHGTPAELLAEVGL 607 The following BLAST results are available for this feature:
BLAST of CV712801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712801 ID=CV712801; Name=CV712801; organism=Citrus sinensis; type=EST; length=771bpback to top |