CV712801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 2.547e-107 Identity = 187/209 (89.47%), Postives = 205/209 (98.09%), Query Frame = -2 Query: 144 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 770 CG+FDVTFMACLPNMVVMAPSDEAELFH+VATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKGRIL+EGERVALLGYG+AVQ+CLAA+++LES GL++TVADARFCKPLD ALIRSLAKSHEVL+TVE+GSIGGFGSHVVQF+ALDGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFNILGQTREALE+M+ Sbjct: 511 CGAFDVTFMACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALEVMT 719
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 370.933 bits (951), Expect = 4.209e-102 Identity = 178/209 (85.17%), Postives = 195/209 (93.30%), Query Frame = -2 Query: 144 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 770 CG+FDVT+MACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP KG+PLEVGKGR+L+EGERVALLGYG+AVQ CLAA++L+E HGL++TVADARFCKPLD LIR LA SHEVL+TVEEGSIGGFGSHV QF+ALDGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQ REAL IM+ Sbjct: 508 CGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIMT 716
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 362.459 bits (929), Expect = 1.497e-99 Identity = 173/205 (84.39%), Postives = 190/205 (92.68%), Query Frame = -2 Query: 156 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 770 CG+FDVTFMACLPNM+VMAPSDEA+LF+MVATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERVALLGYG+AVQSCL A+ +LE GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT N++G REAL Sbjct: 512 CGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.258e-62 Identity = 123/204 (60.29%), Postives = 147/204 (72.06%), Query Frame = -2 Query: 159 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 770 CG+FD TF+A LP VVMA +DEAEL HMV TAAA DD P FRYPRGNG+GV++P +G LE+GKGR++ EG +VALL +GT +Q CL A+ L + GL TVADARF KPLD LIR LA+SHEVL+TVEEG+IGGF SHV+QFLA +GLL+ +K RPLVLPD + DH P A AGL + I TVF L T A Sbjct: 433 CGAFDTTFLASLPGFVVMAAADEAELRHMVRTAAAYDDGPIAFRYPRGNGVGVDMP--ERGEVLELGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAAGLSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLKVRPLVLPDVFTDHAKPEKMYADAGLDAAGIVRTVFTALDHTARA 634
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.985e-60 Identity = 122/197 (61.93%), Postives = 143/197 (72.59%), Query Frame = -2 Query: 177 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 767 GSFD F+A LP VVMA SDEAEL HMV TAA D+ P FRYPRG+G+GV+LP +G LE+GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD +K R L LPD Y DHG P A+AGL + I TVF L Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.985e-60 Identity = 122/197 (61.93%), Postives = 143/197 (72.59%), Query Frame = -2 Query: 177 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 767 GSFD F+A LP VVMA SDEAEL HMV TAA D+ P FRYPRG+G+GV+LP +G LE+GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD +K R L LPD Y DHG P A+AGL + I TVF L Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGATGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BRUC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.985e-60 Identity = 122/197 (61.93%), Postives = 143/197 (72.59%), Query Frame = -2 Query: 177 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 767 GSFD F+A LP VVMA SDEAEL HMV TAA D+ P FRYPRG+G+GV+LP +G LE+GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD +K R L LPD Y DHG P A+AGL + I TVF L Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 5.205e-60 Identity = 114/199 (57.29%), Postives = 145/199 (72.86%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 GSFD ++ CLPNMV+MA SDEAEL HMVAT AIDDRPS RYPRG G GVE+P G+ L +GKGR++ +G++VALL +GT + C A+ L +HGL ++ADARF KPLD L+ LA+ HE+LIT+EEGSIGGFGSHV+Q+LA G+LDG +K R +VLPD + DH +PA A+AGL I VF +LG+ Sbjct: 435 GSFDNAYLGCLPNMVIMAASDEAELVHMVATQVAIDDRPSSVRYPRGEGRGVEMP--EVGVALPIGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGK 631
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.797e-60 Identity = 122/197 (61.93%), Postives = 142/197 (72.08%), Query Frame = -2 Query: 177 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 767 GSFD F+A LP VVMA SDEAEL HMV TAA D+ P FRYPRG+G+GV+LP +G LE+GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD K R L LPD Y DHG P A+AGL + I TVF L Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.797e-60 Identity = 122/197 (61.93%), Postives = 142/197 (72.08%), Query Frame = -2 Query: 177 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 767 GSFD F+A LP VVMA SDEAEL HMV TAA D+ P FRYPRG+G+GV+LP +G LE+GKGRI+ EG +VALL +GT +Q CLAA+ L + GL TVADARF KPLDH LIR LA+ HEVL+ VEEG++GGFGSHV+QFLA DGLLD K R L LPD Y DHG P A+AGL + I TVF L Sbjct: 433 GSFDTGFLAALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAAL 627 The following BLAST results are available for this feature:
BLAST of CV712801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712801 ID=CV712801; Name=CV712801; organism=Citrus sinensis; type=EST; length=771bpback to top |