CV712801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_ANAVT (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxs PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.795e-35 Identity = 84/194 (43.30%), Postives = 116/194 (59.79%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 G +D+ ++ C+PN+V+MAP DEAE+ MV T P R+PRGNG GV L PLE+GKG IL G+ V ++GYGT V + A+ +L HG+ TV +ARF KPLD LI LA+ ++T+EEG + GGFGS V + L LD D V + + +PD ++H +P + A+ GLT IA V Sbjct: 433 GMYDIAYLRCIPNIVMMAPKDEAEMQRMVVTGIEYTTGPIAMRFPRGNGYGVPLMEEGWE-PLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEAL-LDA--DVVVPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERV 622
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_LARHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dxs PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.568e-35 Identity = 89/194 (45.88%), Postives = 122/194 (62.89%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 G+FD++++ C+PNMVVMAPSDE E ++ TA + D P+ RYPRG G G E +PL G+G + +G+ +A+L +G+ V LAA+ L++ +VAD RF KPLD ALIR LA SHE+L+TVEE + GG GS V++ LA G+ TV L LPD Y++HG PA LA GL + I +V Sbjct: 429 GAFDLSYLRCIPNMVVMAPSDENECRQLLYTAF-LHDGPTAVRYPRGTGPGCEPVAAMTALPL--GQGTLRRQGKGIAILAFGSMVHPALAAADQLDA-----SVADMRFVKPLDTALIRQLAASHELLVTVEENVVMGGTGSAVLETLAAAGI---TVPVLNLGLPDHYVEHGDPALLLADCGLDTAGIVRSV 611
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_PSEU5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri (strain A1501) GN=dxs PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.884e-35 Identity = 85/197 (43.15%), Postives = 119/197 (60.41%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTPSHIAATV 767 GSFD++++ C+P M+VM PSDE E+ M+ T + P+ RYPRG+G + P + PLE+GK + G +VALL +G + L L++ TV D RF KPLD AL+R LA SHE+L+TVEE SI GG GS V +FLA +G+L RP++ LPD Y++H P++ LA+ GL + I V Sbjct: 440 GSFDLSYLRCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNASIEPALE--PLEIGKAVVRRRGSKVALLVFGVQLPEALQVGDALDA-----TVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVL------RPILHLGLPDYYVEHAKPSEMLAECGLDAAGIEVAV 622
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.884e-35 Identity = 84/194 (43.30%), Postives = 116/194 (59.79%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 G +D+ ++ C+PN+V+MAP DEAE+ MV T P R+PRGNG GV L PLE+GKG IL G+ V ++GYGT V + A+ +L HG+ TV +ARF KPLD LI LA+ ++T+EEG + GGFGS V + L LD D V + + +PD ++H +P + A+ GLT IA V Sbjct: 433 GMYDIAYLRCIPNIVMMAPKDEAEMQRMVVTGIEHTTGPIAMRFPRGNGYGVPLMEEGWE-PLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEAL-LDA--DVVVPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERV 622
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_VIBVY (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus (strain YJ016) GN=dxs PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.291e-34 Identity = 85/200 (42.50%), Postives = 124/200 (62.00%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 G+FD+++M C+PNMV+MAPSDE E M+ T PS RYPRGNG+G P ++ LE+GKGR++ +GE+VA+L +GT + A+AL + L TVAD RF KPLD ALIR LA H+VLIT+EE +I GG G+ V++F+ + ++ + L LPD++I G+ + + GL I + + L + Sbjct: 433 GAFDLSYMRCIPNMVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFL-----ANALEAAEALNATVADMRFVKPLDEALIRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLN---LGLPDKFIHQGTQEELHEELGLDAKGIEQAIRHYLAK 621
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_PSEA7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=dxs PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.291e-34 Identity = 85/194 (43.81%), Postives = 120/194 (61.86%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 GSFD++++ C+P M+VM PSDE EL ++ T D P+ RYPRG+G + P + P+E+GKG + G +VALL +G + A A+ + GL TVAD RF KPLD AL+R LA SHE+L+++EE ++ GG GS V +FLA +GL V L LPD Y++H P++ LA+ GL + I V Sbjct: 438 GSFDISYLRCIPGMLVMTPSDEDELRKLLTTGYLFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGKVALLVFGVQL-----AEAMKVAEGLDATVADMRFVKPLDEALVRELAGSHELLVSIEENAVMGGAGSAVGEFLAREGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_SHEAM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dxs PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.686e-34 Identity = 82/194 (42.27%), Postives = 119/194 (61.34%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 G+FD+++M C+PNMV+MAPSDE E M T ++ PS RYPRG+ G E +P +GKG + +G+++A+L +GT + A+AL + L TVAD RF KPLD AL+ LA SH+VL+TVEE +I GG GS V++FLA L ++ + +PD +I HG P + L++ GL + I + Sbjct: 433 GAFDLSYMRCIPNMVIMAPSDENECRQMFYTGYCYNEGPSAVRYPRGSATGAEQIEEMTALP--IGKGVMRRQGQKIAILNFGTTL-----AAALTAAESLNATVADMRFVKPLDEALLLELAASHDVLVTVEENAIMGGAGSGVLEFLASKNRLKPLLQ---IGIPDEFIKHGGPEEILSELGLDAAGIEGQI 616
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_VIBVU (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio vulnificus GN=dxs PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.202e-34 Identity = 84/200 (42.00%), Postives = 124/200 (62.00%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 G+FD+++M C+PNMV+MAPSDE E M+ T PS RYPRGNG+G P ++ LE+GKGR++ +GE+VA+L +GT + A+AL + L TVAD RF KPLD AL+R LA H+VLIT+EE +I GG G+ V++F+ + ++ + L LPD++I G+ + + GL I + + L + Sbjct: 433 GAFDLSYMRCIPNMVIMAPSDENECRQMLYTGHK-HQGPSAVRYPRGNGMGT--PIESEFTALEIGKGRLVRQGEKVAILSFGTFL-----ANALEAAEALNATVADMRFVKPLDEALLRQLANEHDVLITIEENAIAGGAGAGVIEFMMQEKIMKPVLN---LGLPDKFIHQGTQEELHEELGLDAKGIEQAIRHYLAK 621
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_PSEAE (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa GN=dxs PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.876e-34 Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 GSFD++++ C+P M+VM PSDE EL ++ T D P+ RYPRG+G + P + P+E+GKG + G RVALL +G + A A+ + L TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA +GL V L LPD Y++H P++ LA+ GL + I V Sbjct: 438 GSFDISYLRCIPGMLVMTPSDEDELRKLLTTGYLFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGRVALLVFGVQL-----AEAMKVAESLDATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_PSEAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dxs PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.876e-34 Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 GSFD++++ C+P M+VM PSDE EL ++ T D P+ RYPRG+G + P + P+E+GKG + G RVALL +G + A A+ + L TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA +GL V L LPD Y++H P++ LA+ GL + I V Sbjct: 438 GSFDISYLRCIPGMLVMTPSDEDELRKLLTTGYLFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGRVALLVFGVQL-----AEAMKVAESLDATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620 The following BLAST results are available for this feature:
BLAST of CV712801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712801 ID=CV712801; Name=CV712801; organism=Citrus sinensis; type=EST; length=771bpback to top |